HsaEX0074410 @ hg38
Exon Skipping
Gene
ENSG00000102984 | ZNF821
Description
zinc finger protein 821 [Source:HGNC Symbol;Acc:HGNC:28043]
Coordinates
chr16:71861776-71865048:-
Coord C1 exon
chr16:71864903-71865048
Coord A exon
chr16:71864138-71864242
Coord C2 exon
chr16:71861776-71861942
Length
105 bp
Sequences
Splice sites
3' ss Seq
GCCTATTTGTTGAATCACAGGTC
3' ss Score
6.76
5' ss Seq
CAGGTATGG
5' ss Score
9.99
Exon sequences
Seq C1 exon
GTGACAGTGAGGGTGATGAAGAGGAGACGACACAAGATGAAGTCTCTTCCCACACATCAGAGGAAGATGGAGGGGTGGTCAAAGTGGAGAAAGAGTTAGAAAATACAGAACAGCCTGTTGGTGGGAACGAAGTGGTAGAGCACGAG
Seq A exon
GTCACAGGGAATTTGAATTCTGACCCCTTGCTTGAACTCTGCCAGTGTCCCCTCTGCCAGCTAGACTGCGGGAGCCGGGAGCAGTTGATTGCTCACGTGTACCAG
Seq C2 exon
CACACTGCAGCAGTGGTGAGCGCCAAGAGCTACATGTGTCCTGTCTGTGGCCGGGCCCTTAGCTCCCCGGGGTCATTGGGTCGCCACCTCTTAATCCACTCGGAGGACCAGCGATCTAACTGTGCTGTGTGTGGAGCCCGGTTCACCAGCCATGCCACTTTTAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000102984-'20-31,'20-29,25-31
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.992 A=0.109 C2=0.002
Domain overlap (PFAM):
C1:
NO
A:
PF056057=zf-Di19=PU(39.0=65.7)
C2:
PF056057=zf-Di19=PD(57.6=60.7),PF116003=CAF-1_p150=PU(2.8=8.9)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AGATGGAGGGGTGGTCAAAGT
R:
AAAAGTGGCATGGCTGGTGAA
Band lengths:
244-349
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development