HsaEX6055550 @ hg38
Exon Skipping
Gene
ENSG00000188086 | PRSS45
Description
protease, serine 45 [Source:HGNC Symbol;Acc:HGNC:30717]
Coordinates
chr3:46742092-46744755:-
Coord C1 exon
chr3:46744643-46744755
Coord A exon
chr3:46742913-46743082
Coord C2 exon
chr3:46742092-46742583
Length
170 bp
Sequences
Splice sites
3' ss Seq
GTCACTGCTCACCCTGCTAGGCT
3' ss Score
6.36
5' ss Seq
TATGTGAGT
5' ss Score
5.56
Exon sequences
Seq C1 exon
ATGACCCGCCATTGGCCCTGGGAGGTGAGCCTCCGGATGGAAAATGAGCACGTGTGTGGAGGGGCCCTCATTGACCCCAGCTGGGTGGTGACTGCGGCCCACTGCATCCAAGG
Seq A exon
GCTCCACAGCCAACTCCATGCTGACCCCAGAGCTGCAGGAGGCTGAGGTGTTTATCATGGACAACAAGAGGTGTGACCGGCATTACAAGAAGTCCTTCTTCCCCCCAGTTGTCCCCCTTGTCCTGGGGGACATGATCTGTGCCACCAATTATGGGGAAAACTTGTGCTAT
Seq C2 exon
GGGGATTCTGGAGGGCCATTGGCTTGTGAAGTTGAGGGCAGATGGATTCTGGCTGGGGTGTTGTCCTGGGAAAAGGCCTGCGTGAAGGCACAGAATCCAGGTGTGTACACCCGCATCACCAAATACACCAAATGGATCAAGAAGCAAATGAGCAATGGAGCCTTCTCAGGTCCCTGTGCCTCTGCCTGCCTCCTGTTCCTGTGCTGGCTGCTGCAGCCCCAGATGGGCTCCTGACCTCCCTACCTTTTCCTCCTCCTGCCTTGCCTCTGCTGAATGGGGCCAGATGGTTTGACCAAGGTCATGTGTCCATCTTCAAAAAGAGTCAGGGTGGGGAAGAGTAACCCCTGGGAGAATGGGTCTGGCTTTGGCATCCCGGTGAGGAGAAGTGTGGTGGATGACTAGGCCTTGGGTGAGCAGGAGAAGGGAAGTGTGGCCTAGAAGGATTCTGGAATCTGGGACCAGGAGAGCAGGGATTAAACATGTGCAAACTTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000188086_MULTIEX1-2/2=C1-C2
Average complexity
C2*
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0008921=Trypsin=PU(35.2=97.4)
A:
PF0008921=Trypsin=FE(23.1=100)
C2:
PF0008921=Trypsin=PD(19.7=57.7)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TCCGGATGGAAAATGAGCACG
R:
GACCTGAGAAGGCTCCATTGC
Band lengths:
254-424
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains