HsaEX6063680 @ hg38
Exon Skipping
Gene
ENSG00000165695 | AK8
Description
adenylate kinase 8 [Source:HGNC Symbol;Acc:HGNC:26526]
Coordinates
chr9:132814638-132827054:-
Coord C1 exon
chr9:132826854-132827054
Coord A exon
chr9:132823205-132823336
Coord C2 exon
chr9:132814638-132814727
Length
132 bp
Sequences
Splice sites
3' ss Seq
CTCATATCCTCTCTTTCCAGCTC
3' ss Score
10.08
5' ss Seq
ATGGTGAGT
5' ss Score
10.13
Exon sequences
Seq C1 exon
AGATTTATCACACCACCTTTGACTGGCCACCCGAATCTGAAATCCAGAACCGTCTCATGGTGCCAGAGGACATCTCAGAGCTGGAGACGGCTCAGAAACTGCTGGAGTATCATAGGAACATCGTCAGGGTCATTCCCTCCTACCCCAAAATCCTCAAAGTCATCAGTGCTGACCAGCCATGTGTGGACGTCTTCTACCAGG
Seq A exon
CTCTGACCTATGTCCAAAGCAACCATCGTACTAATGCCCCGTTCACCCCGAGGGTGCTGCTGCTCGGGCCTGTGGGCAGTGGGAAAAGTCTGCAGGCCGCCCTCCTGGCCCAGAAATACAGGCTTGTCAATG
Seq C2 exon
TCTGCTGTGGGCAACTGCTGAAAGAGGCTGTGGCAGATAGGACCACGTTTGGCGAGCTCATCCAGCCCTTCTTTGAAAAGGAGATGGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000165695_MULTIEX1-11/13=10-12
Average complexity
S
Mappability confidence:
93%=93=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.015 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0040617=ADK=PD(29.4=76.5)
A:
PF0040617=ADK=PU(13.4=53.3)
C2:
PF0040617=ADK=FE(16.8=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ATCACACCACCTTTGACTGGC
R:
CCAAACGTGGTCCTATCTGCC
Band lengths:
247-379
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains