HsaEX6092932 @ hg38
Exon Skipping
Gene
ENSG00000079805 | DNM2
Description
dynamin 2 [Source:HGNC Symbol;Acc:HGNC:2974]
Coordinates
chr19:10802288-10808580:+
Coord C1 exon
chr19:10802288-10802358
Coord A exon
chr19:10805916-10805967
Coord C2 exon
chr19:10808569-10808580
Length
52 bp
Sequences
Splice sites
3' ss Seq
TGTCTGTTCTTTGGTTTCAGTGC
3' ss Score
10.29
5' ss Seq
CAGGTAGCA
5' ss Score
6.37
Exon sequences
Seq C1 exon
ATTCTTCTGCTGATCGACATTGAGCAGTCCTACATCAACACGAACCATGAGGACTTCATCGGGTTTGCCAA
Seq A exon
TGCCCAGCAGAGGAGCACGCAGCTGAACAAGAAGAGAGCCATCCCCAATCAG
Seq C2 exon
GGGGAGATCCTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000079805-'49-47,'49-44,56-47
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.071 C2=0.000
Domain overlap (PFAM):
C1:
PF0103115=Dynamin_M=FE(7.8=100)
A:
PF0103115=Dynamin_M=PD(4.1=66.7)
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains