RnoEX0029062 @ rn6
Exon Skipping
Gene
ENSRNOG00000007649 | Dnm2
Description
dynamin 2 [Source:RGD Symbol;Acc:2513]
Coordinates
chr8:22518232-22522815:+
Coord C1 exon
chr8:22518232-22518302
Coord A exon
chr8:22521892-22521943
Coord C2 exon
chr8:22522804-22522815
Length
52 bp
Sequences
Splice sites
3' ss Seq
CTTCTCTGCTTCTGTTACAGTGC
3' ss Score
9.92
5' ss Seq
CAGGTAGCT
5' ss Score
6.52
Exon sequences
Seq C1 exon
ATCCTTCTTCTGATTGACATTGAGCAGTCCTACATCAACACAAACCATGAAGACTTCATTGGATTTGCCAA
Seq A exon
TGCCCAGCAGAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACCTAACCAG
Seq C2 exon
GGGGAGATCTTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000007649-'27-23,'27-20,30-23
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.007 A=0.185 C2=0.000
Domain overlap (PFAM):
C1:
PF0103115=Dynamin_M=FE(7.8=100)
A:
PF0103115=Dynamin_M=PD(4.1=66.7)
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]