HsaINT0042488 @ hg38
Intron Retention
Gene
ENSG00000178662 | CSRNP3
Description
cysteine and serine rich nuclear protein 3 [Source:HGNC Symbol;Acc:HGNC:30729]
Coordinates
chr2:165657761-165676608:+
Coord C1 exon
chr2:165657761-165658020
Coord A exon
chr2:165658021-165676311
Coord C2 exon
chr2:165676312-165676608
Length
18291 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAAA
5' ss Score
8.38
3' ss Seq
TTGCTGCTTTGTGTTTTTAGATG
3' ss Score
10.23
Exon sequences
Seq C1 exon
CTTCCTCCATTCTCAAAAGGGAGAAACGACTGAGGACAAAGAATGTACATTTTAGTTGTGTCACCGTGTACTACTTCACCAGGAGGCAAGGCTTCACAAGTGTGCCCAGTCAAGGGGGAAGCACCCTGGGGATGTCCAGCCGCCATAACAGCGTGCGCCAGTACACTCTTGGCGAGTTTGCAAGGGAGCAGGAGAGGCTCCACCGGGAGATGTTGAGAGAACACCTTAGGGAGGAAAAGCTGAACTCCTTAAAACTAAAG
Seq A exon
GTAAAAAACAAACTCATTTTCTGCAAAGTCTCATATCCTTACAGCAATTTGATTGAGTTAACCATTTTCATATTTATAATCACGAAACAAACTGGGCACTTTACATAACAGACTGCTTGCTGACATTTTTTTAAAGCAAAACGATATAGTCTGTTTGCTAAAAGCAATGTGGGAAACTTACCTGACATCATTTATTCATTCATTCCACCAATATTTACTATTGAATATTGTGAGATCATATGCCCTGTGCTTGGGCTAGGGCTAGTAGGAGACCAAAAATAGATGTGGTCCTCTCTCTATAGGAACTTATAGAATAGTAGAAAAGAAAAATATTAATAAAAGTGCTAAACAAAATAAAAGCACAACTTCATTGAGTGCAATGTAGAAGAGTTGCAAGGTATTATGAAAGTTTATAATAGGGAATTGATGTGGTCAAGGAGGTCAAGGAAAGCTTTCTCAAGGAAGTGAAATGAAAATCTGAAGAGGTGACTAGGCAAAGAGGATTGGCAAGAGCATTTCAGATATCAAGAAAAGCCAGAGCTACTGTATTAGTCTGTTTTCATGCTGCTGATAAAGACACACCCGGGACTAGGTAATTTATAAAGAAAAGGAGGTTTAATGAACTCAGTTCCATATGGCTGGAGAGGCCTCACAATCATGGCGGAGGGCAAAAGGCACTTATTACATGGCGGCAGCAAGAGGGAAAGTGAGAGCCAAGTGAAAAAGGAAACTCCTTATAAAACCATCAGATCTCATGAGACTTATCACTACCATGAGAACGCTATGGGGGAACTGCACCCATGATTCAATTATCCCCCACTGGGTCCCTGCCACAACACATGGGAATTATGGGAGTTACAATTCAAGATGAGATTTGGGTGAGGACACAGCCAAACCATATCAGCTACCTTGTGCCAGGAGGGAACACAGTGAGTCCACAATGGCTTGTGTGGCTGGAGCAGAGGCAAGAAGAATGAAGTAACGTGAAGGAGGCAGGAATGAGGCTTTGTAAACCATATTAAGGTATTTTTTCCTCTACTTCCTAAGGCCATCAAAAGTCGTCAAGAGTTTTAAGCTGAGTTGGAGTGGCAGAATATGATCCAGCTCACGAAATGGTGGGAGAAAAAGTTATGGGTAGGGTAAGTGGTGTTGAGACGGGATGGAATATATGAAGTTAGACCAGTTAGAAAGCTGTTACCACAGTCAGGGAGAGAGGTGACAGTAGGTTATATTAGACTGATGATGGTAGGGGAGTCGGAGAGAGATGAATAGAGGGAGAAATTTAGCAAACAAAATCAGCAGTGCTTAATGACAGGTTGGATTTAGGAGGAAGAGAAGGAGATTGTCAGGAATGACCCCTAAATTTCTGGCTTGCAAAACTGAATGGGTTGTAGGTGATAATACTGTTTTGCTATGACAAGGAACACAGGAAGGGGACAGGCTGGGGGTGGGATGTGGATAGTGAGATCATTTTTGGACATACTGAGTTTGAGGGGCTTTTGAGTTACCAAGAGATGTCAGGAAGGTATCCAAGTGGAAAAACTTATTTTTGTGCCACTTTAGAGATTAAATGGAGAGAATTATGACACTGAAAACATCTTTTGTCAACTAAAGACACTCTTCCGTTGGATTATCACCTTATCAATTGATAGGAAATATTTTTCCATCATTATTTAATGACAACGAAAATCTTTCTTAGGTAATCCAGCGTACTTAACATAAATGGTCGTTTGTTAAATACCTGAAGCACCATAAGCACAGCTGGGTTAGCATTACTTTTAGTTTTCAGAATAAAGTCAGTCAGCAGGGGTGTGATGTGTGTTTCAAAACATCTTGTTTTCATGTACTTTGCAATGTATGTACGTGCCATGTTCCCAATTTCATGGCAAAGCAGTCACTTAAATTAAGCTGGATACAAGCTAGCTTAGAGCATGTCTCTTACTTTGGCAGTATTTTTGGCAGGTTTCACTGAAAGTCTCGGGTCTCATTAAAAGTTTTGTCAGTAGCAATCCTCTATTATTGTTGTTGTTTTTTATGCTTGCTCTGCATGTAGCTTAATTTAGTAAAAATTCTCAGATTTGCTTCTCTTCTGAAATCCACCCTCTGCCTTTGTCACCCACGGCAAACCAACTCTACCCTCTACCCAAAGAGTGAAGTCGTTCTCCAAATTCAAGTATTGATAGCACAATAGTAATGGCTGCCAATTATTAAGTGATTTTATTTGCCAGGTACTTTATGAACATGATTTAATGTAATCCTCAGGAAGACCCAGTGGAATAGGTAAATTATTAGAACATGTTTACAACTGAGAAATAAAAGAAGCACAGAGATGTTAAGTTGGCTCATCCAAATAGAAAATGGATTCTATTATTACTTCCTATTCTTAAATTAATTGATTAGCTCCTATAGGCATTGAGAAAGACAGTCTTTGTACCTTTGGGGAGTCATCCTCTCTGGGGTCTGGTACTGTGTGCAGTGGTTTTTAACAGCTGGAGGACTGACACGCTGTCTGAGAACCAAAAGATTTATTGTGGTGAACTCCGAGACACGTGATACATGTGATGAATGTAAGGGGAAGTCACAAACCTACAGCAACCTTCTCCCATGTGCTATGTACTATAATTTGTATCCAGCTACTTCCATACATTTTTTAAATAAGCTGAATGAGAAAAGAAGGAGCCAAAAGACCACTCTATTACTAATTTGTTTTTTAAAATTCTGCTTATTGTTGGATGTTGGAGAGGCAATCATCTGAGCTAGTGTCAGGTATCAGTTTGTTATTGGTAATTGAAAACACAGTTTTCCCCTTTGGTGAAATGTAAACAAAAGGCATTTGGTTATAATCACTACTTCCAAATAAATACCAACCTAAAAGATAATGACATTTTGAGATGATCCAATCTTAACCTCACTGTGCTTAAAGTATTCAGAAACACATGTCACACAAAGCTAAAAGATCACAGCAATATGAACCAGCTTTTTAAAACTCTGAGGAGAATTAATGGAGAAAAACTTGTGTATATTTTCATTGTAATTCCTCTAGTATGTGAACTTTTATGATTTTTAAAATATTATTGACTGTGGTTTAGCTATCCAAAGCCAGCTACCCCAAAACATAGCTATTCAAAAATTTCACTCTGATACTTGAAATTTCACTTTTAATGTGGTATTTGTTTGAAATATAAACACCTCTGGTGTAAGTAACAAAATATAGATGCCCCTCAATTTGCAGTGGAATTATCTCCTGATAAACCCATCGTAAATTTAAAATATCATTAAGTTGAAAAATGCATTTAATACACCTAACGTACTGAACATTATGGCTTAACTTAGCCCACCTTAAACATGCTCAGAACACTTACATTGGCCTACCGGAGAGGAAGATCATCTGGCCACACAGTTTGCCATAAGGTAGCAGTTGTTCATCCTCATGATTGCATGGCTGACAGAGCTGTCCCAATACCCTGTATCATGCAAGGATATTGCTAGCCCAGCAAAAGATCAAAATTCAAAATTCAAAGCCTAGTTTCTACTGAATGTATATTGCTTTTGCACCATCATAAACTCATGAAAAGCCAAACCATCATAAACCAGGGACCTTTTGTAAATGTGGCTAAATTGATTTCATTATTTTGACTGGGGCAGCAGAAGGGTCATTGGTACGGAAAAGCATTCCAGAAAGAAAAGTAAGGATTGTTAAAGACAAACTTTGCTCACTGTGAGTTGGCCTGAGTTGGTCCTTTGTGAGTGACAGTGAATTGCCCGCTGAATAAGGAGTGAGGAAAGGCAGCATCTGACAAGAGAGACAGTTTCCAAACCCATCATTATGGAGACATGTAGTACACCATGGGAAACTCACCGAACTCAGAGCTAGATAGTTTTCCTTCTACTTCTTTGAGAACCAACAGCCCCAAAACAGGAAGAAGAAGTTCCTCTTTCCACTGTCCCTCTGTATCTTTCCAGGGTGTCTTTGCTGAGTTCCAAATAGAGAACACATTTATATAATGGCACCTCTCATAATGGGGCTTTAATAGAGAAATATGAGAAAAAGAAATACATGCATATACACTTCTAGATATTATAGTACATCTATAGATGTTATTTTGGAAACAAAATAAAGATGTTATTTTGAAAACAAAATAAAGATGTTATTTTGAAAACAAAATAAAAGTAGGAATGTATGTTTTGATCATAAAATTGCTCCTAATTTAGTAATTCATCTTCCAATCAAGTTATGATTTTAGATCTATCAAAAAATAATATGTATGTATTACCTTAGTAGAACAAATCCAATTCTATTTGGGGGAGTTCAAGTGTGTCTTTTTTTGTTAGTGGTGCTGGTCTTTCAAACATTGTCTATAAACAACTAATAGAGAAAACTGATTGAATAAAATGCATTTCTAGAAGAAATAAGTAGCTTTAGATTTCTAAATTACAGAGCACAGTTCTTCTTCTCTGTCAAGCCCATTCAAACATGTCATACTCTTCACAGTAATCAATGCAGTCATCTTAATACTATACACTTTTCCAAATTAAGTGCTTAGATTTCATCATCTGCACCACATTGTTGAACAATTACATTAGACTTTATTCCCAATTCACATGTATCTGTAAAGTGCATTAGGCAGCCATTTGTATGTTTTAAAGAACATTGGTGTTCCAATTGCCTCTGGGTTCTATCATACTGGATTCTACCACCTTGTTCTAAGAAATTTAATTTAGCTTTCACAGCTTTGGCTTGCCTTTTTATTTTTTCAACCCAAGTTGTTCCTCCTATTTCTGAGATCCAAGTGTCTATCTTCATTCTTGCTGCCATTTCTAATTGCTTTTCAGAATTATGTACTTTTCTCAAGTTTTCAGTCATATGTTCCTTGAGTAATGTGTGGCTGTTACTTGCCCTCCTTCCCTCATTTAAAAAACAAACAAAAAAAGTTGGCAGATGGTAACTCTTCCTTTAATGATTAACCTTTAAAAAAACTCTACATAAATTTTTTTCATCCCAAATCTCAGATTTATGACTGCTTTGCCCATTTAGTGACTTACCAATGCAATATTATAATTCTCCACTTTACCTCCAGCCCTGCCCTTTGTATCTCCTCAAAAGTCTTTTGATTTATCTTCCAGATAAGGGCCTTAAATGCCCTGATAGATAGAAGAGATTAGAGGCTTTTGAGAAACAGTTGAACTATATCAATCATCAACATTTTTGGATGTGTTATTAACTATTTCCCCATACTCTGATTCTTTATTAGATGTGTCAGAACCTGCTGGTCATGATATGTTTGAACTCCACTTATCCTTACAGAATTTCTGTTAGATTGTAGAGATTATGCCACAGCATACTTAGTGTCAGAGCTTCCGGAATGCATCCCCAAATGGAGGCCCACTTTAACATCAAATGGAAAACTTTGATGTGCTCAATACCTGCTCTGTCACATACACAACCTATTTTGACAGAAAATAAACCTAAACAAAATGATGGAGACTGAAAGGGTGGGCTGCAGCCCTGGGCAAATGCAATACATTTAAGAATATGTTCTTTCAAAATATTGTTGGTGTTTTAGTTTAAATGGAACAACTAAGCATATGTAATCAAATCTTTAGTTTCTTTCTCTGCAACAACCATTGGACTGTTAATTTAGGGAAGTCAATTGCACTGATTCTACTGATTAAAATGTGGGGTATATTCAGTGATGTGCTGGAGCCAGCTTGTTAAAGTTGCTCACTAAAGTGGATTGTGTACTTCTCTTCCCAATGGTAGCTTGAAATCAGCTATGATGGGTGTATTTAAACCATGAGATTTGGCAAACATGACAAATTAGATTTTTTTTTCCAGAGTGTCAGTTGTTAAATATTTACTAGCATTCTACTAGATCCGTCTGGCTTATTAGCTACCACTGAAAGAAGCGATGTTGGTCTAAATCAGAGGGTAGGAGAAAAAAATTTGAGAGGAAATTTTCATATGTCTTATATGTCGATACTATCATCATCCCTCCTGGTGACTGTGTGGTAATATGTATTCCAGGGTCCTATTGTGACTTCAGGTTGTTGAAATTCTCATAAGCTAACAAAACAACCAAACATTCCTAGTTCTTCGAGGGTATAATTAAATTGGTTCCAGTTTGCCACCTGCAATTAACAGCTAATGAGCTAAAGAACTATATTATAAGATGTGACTCAATATCCAAATGATATACATATTTTCCTTTAGTTTTCCAGAGACCTTACAGACTAGGTCACTGTCCAACTTGTACCACAAAACCAGGAATTTATTGTATTAAAAACATATCCTATGCTTTCTAGCCTCTTATTGAACAATTCTGGTGATCCAGAGCACACAGCTTTTTGAAATAGCGCATTTCATTTTGCAGCTTTAATTGTTAGAAAGCTCTTCCTAACATTGAGCAACCTGCTGCCATGTGACCCGAATTCTGCCCCATAAGTACACAGAGTAAATCTTCCCTATTTTCCGAATTCTGGCTGTTTGAAAGCAATGGTGATGGACATGCAAATATTTGAAGAAAGCTTATGGGCTCTATATGTTTCTGTTCTGCAGGATTAAACATCCTTGGTTCTTTCCACTGATCCTCCTGGGGCATGGCTTTTAGGCTCTTTGTTGCCCTGGTTTCCTTCCTCTGGATACAGGGCTATTTATGTCTCCTTTATAATATGGTACTTGACCTGGACATGGTGCTCCAGGAATATGTTACGTTATCTTCTCCCAAGTTCGGGATGTTCTTTCCATGGAATACACTAAGGATATAGTGGCTTTTGGACTGTGATCAATTTTTTTTTGTTCTTAGTAAGCTGGTGGTAAGCAAAAAACAAACAAACAATAAATAAGCTAAACTAAACAAAAAACAAGCAAACAAAACTCAGATCTTTTAAGCCAACTCTGCATTATGATATAAACCAAAATTTTGTAACATCTCCATGGCAAAAGCCCTCTTTAGTGCTAGACATGGCCTGTAGAGAGTGATCAATAAAGTTTTGTTACATTTAATTTCAATAAACTTGGTCTTGTCATCTGTAGATGTGATAAGCTTGCCTTTTAGGTCTTCATCCAGGTTATGGACTTAAAATTGCATTTAACAAAACAGGGCCAAGTTTAGGATATCCTCTCAAGGTAGCTATCCTCAAGAGTAAAAGGAGAAGCACCCCACCATGACCCCCAGGGAGAAACATTGCCAGGGTGCGCCACTGCTACTGATAGGATGTATAGATGCCGTTATCCTTCATTCCTGGCCTCCTTGTTGGTACAAAAGAGGCTGAGCATCACTGGTATTAGAGGCATTTTTACTGCTCAGCTAACTAAAAGTCATATATCCAACCATATTCTTATTAATCAGATTACATTCCATTTTCCACATGAAGAGCATAAGAAATTCTGTCAGAGTGAAAGAATGGGAAATTCTCAGAACTATATTCTTGTCTTAGAGACAAAATAAGAAATTCTCTGGCCGGGCAGGGTGGCTCGCACCTGTAATCCCAGCACTTTGGGAGGCAGAGGCTGGAGAATTGCTGGAGGCCGGGAGTTAAAGACCAGCCTGGGCAACATAGTGAGACCCCTTCTCTACAAAATAATTTAAAATTTAGCTGGGCAGTTGCATGTGCCTGTAGTCCCAGCTACTTGGAAGGTTGTGATGAGTGCATCACTTGGGCCCTGGAGTTCAAGGTTGCAGTGAGCTATGATTGTGCCATTGTACTGTAGCCTGGGTCCCAGGCGACAGAGTGAGATTCTGGGAAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAAGAGAAAGGAAGGAAGGAAGAAAGGAAGCAAGGAAGGAAGGAAGGAAAGAGAGAGAGAAAGAAAGAGAGAGAGGAAGGAAGGAGGGAGGGAAGGAAGCAAAGAGAGAGAGGAAGAAAGAAAGAGAGAGGAAGGAAGGAAGGACGGAAGGAAAGAGAGAGGGGAAGAAAGAAAGAGAGAAAGGAAGGAAGGATAGAGAGGAAGAAAGAAAGAGAGAGAGAGGAAGGGAGGAAGGAAGGAAAGAGAGAGGAAGAAAGAAAGAGAGAGAGAGAAAGGAAGGAAGGAGAGAGAGGAAGAAAGAAAGAGAGAGAGAAAGGAAGGAAGGAAGGAAGGAAAGAGAGAGGAAGAAAGAGAGAGAGAGAAAGGAAGGAAGGAAGGGAGGAAAGAGAGAGAGGAAGAAAGAAAGACAGAGAGGAAGGAAGGGAGGAAAGAGAGAGAGGAAGAAAGAAAGACAGAGAGAGGAAGGAAGGAAAGGGAGAGAGGAAGAAAGAGAGAGGAAGGAAGGAAAGGGAGAGAGGAAGAAAGAAAGAGAGAGAGAAAGGAAGGAAGGAAGGAAAGAGAGAGGAAGAAAGAGAGAGAGAGAAAGGAAGGAAGGGAGGAAAGAGAGAGAGGAAGAAAGAAAGACAGAGAGGAAGGAAGGGAGGAAAGAGAGAGAGGAAGAAAGAAAGACAGAGAGGAAGGAAGGGAGGAAAGAGAGAGAGGAAGAAAGAAAGACAGAGAGAGGAAGGAAGGAAGGAAGGAAAGAGAGAGGAAGAAAGAGAGAGAGAGGAAGGAAGGAAGGGAGGATAGAGAGAGATGAAGAAAGAGAGAAAGGAAGGAAGTAAGGGAGGAAAGACAGAGAGGAAGAAAAGAGAGAGGAAGGAAGGAAAGAGAGAGTGGTGTTAAGAGAGAGAGAAAGGAAGGAAGGAAAGAGAGAGGAAAACAGAAAGAGAGAGGAAGGAAGGAGAGAGAGGAAGAAAGAAAGAGAAAGGAAGGCAGGAAGGAAAGAGAGAGAGGAAGAAAGAAAGAGAGAGAAAGGAAGGACGGAAGGAAGGAAGGGAGGAAAGAGAGAGAGTAAGAAAGAGAGAGAGGAAGAAGGAAAGAGAGAGAAAAAGGAAGGGCGGAAGGAAGGGAGGAAAGAGAGAAGAAGAAAGAAAGAGAGAGAGGAAGGAAGGAAGGAAGGAAAGAGAGAGAGGAAGAAAGAAAGAGAGAGAGAGGAAGGAAGGAAGGAAAGAGAGAGAGGAAGAAAGAAAGAGAGAGAGAAAGGAAGGAAGGAAGGAAAGAGAGAGAGAAAGAAAGAGAGAGAGAGAAAAGGAAGGAAGGAAGGAAAGAGAGAAAGAAAGAAAGAGAGAGAGAAAAGGAAGGAAGGAAGGAAGGAAGGAGAAAGAAATTTTCAGGACTAGAGCACTGGTTTTCCAACTGTAATCCATGGGGTCTGAGATTAGGGACCAGGGCAGAAAGCCCAAGATGCAGATCTCATTCTCACTTTTATCTTCCATATGTTAAGCTTCTGCGTGGAATTTTAATTGAAAAATGGACACATTCCCTGTAGTAAACTTAGGCAATAGTCTAATAATTACTGCTCTTTTTTGTCACATGTACAGAGACCATCTTTTTAAGTATTTTTTTCTAGAATATTGTTATTCAGAACTAGCTTTTTTTTAAAAAAAATTGTTCTCACTTTGATTATCTTGTAATTCTTTACTCCATGACTCTTCAAAACTGTTACACTGCACAACCATAACTTCAAGCTGTTTCATTGCCTCAAAACATAAATTGTCTGGGCCTGGAGATTCTTCCATAAAACAGCGGAGTCCTCTTTCGCTGTCTCCTCACCTCCCTTTTGCTTTAAATCCTTCCTGACATGCCTGTTCTCACATTTTTGGTTTGAAGGTTTTTCTTTTTGAAAAAGACTATGGAATCTGAATAGGAAGTAAATAATTCTGCTTTGTGACTTTGTACCTAGCCTTCCTTTTCATGTCTATTCTCTCTTCCACCCCACCACTTCAATAACTTGCACATATATTTTGTGCTCTTACAACATTATATCATATTTATTACACGGTCATCTCCCCCAGCAGACTGGAACCTCCTTATATGGCAGAACTGTTGTACATCTATAAAACTCCATACCTAGTACAGTGCTTGGCAATATGCCATAGTGATTAAGAATATTCACTTATTCATTTTAAAAATGTATTAATCAATTACTATGGGACTGGTAATTATCAAGGTGCAAAGGATACACTGGTAAACAAGACAGATGCCATCTCTGCTCTCAACATGCTCACAGTATGATAGGGGAGATAAACATTAAATCAATCACCAAAGCTAATATAGTCTTACAACACTAGACCACAGGCTATACAGATTTCTCAGGCCAGGATAAATAAGTTAAAAGTCAGCTGAGAAAATCAAAAGAGTAATACGTTAGCTCAACCAGCTTTATCTGATGTCCTCTCCATTAGAAAGGCCACCTCCACATGCCCAAAAAGTAGGACCCAAAGGAAATACTAACTGGTGAGATGTTGTATCTTTGGTTTGCTCTCTGTTTTCTTCTTTCCTGAGCTCTTGCTTTCTGTGTCTGAATCATATCCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCCACCTCCTGGATTCAAGCAATTCCCTTGCCTCAGCTTCCCAAATACCTGGGACTGCAGGTGCCTGCCATCAATCCTGGCTAGTTTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGTCTGGTCTTGAACCCCTGAGCTCGTTATCTGCCTGCTTCAGCCTCCCAAAGTGCTGGGGTTACAGGTGTCAGCCACCACGCCCAGCCCATATCCTTTATTTCTGAGTGAGCTATTTCTAGGGAAGCTTATTCTGCTCTTTTATCTCTTGCCCCACAGCACTGAGATCAGCTCTTAGAGTGTACTGCCACGTTGTCTTTTTTTGTTTCCTTTTGTTCAGTTTTTCTACCATTGCTCTTAAGAATTTTTACTCCAACTGGTCTTGAAAGCATGGCTCAAGCTTTGGAGTCAAATAAACCTAAGTTTGATCTTCAACATCATCATTAATTGGCTATTTAGCTAGACTTTGGCAAATTATATTCTCCGAACTTCAATTTTCTCAACTACAAAAAAATTTTACTTTATAAGATTGTCATGCAAATTAGGTGAGATAATTTATATACAGTATGGAACTTAATGGCTAGTATTTACTATATGGCAGCTTAGGTCATTCTCAACATCATCATCCTTATTATAATATGCAGTAATCAGTGTCTGTGAAGTTGAATTAGTTTTTCACATTCTTGTTTCTGGAAATCACTCTCTTTTTCACACGTGTGAATAATTCAGTAATGACCAGAAAATTTTGTTAGTAAACATAGCTTTTAAGTGCTAAAAAGAAGTGTTTTTATTTTTGTTTTTTGTTTTATTTTGTTTTGCCCTGGCATTTTAGTCAATCTATACTTTTAGTATTGTTTCTCTCTTCTAATCATTTTATTAGTTGAATTGAATTAGGTGTTTGGGGGCCCTTGATGGCACCAAAAATTTCATCTCATTAAAATTTATGGAAGAACTCATTCACAACATGATATGGTAAAAACAAACAAAAAGTTGAGCCTTGATTTTTATTTGGGATCCCTATATTTGGCTCAAAGCTGTCTGGGTATCATTCCACTGATTCTGACAGTAATGTGTCCCATCCCTCAGGTATGTTTAGATGGGCAAAATGATTTATTTCTATAGGGCTTTGGGAATGGTTTTCTCACAGTTATCAGTGCATACGAATCTGCAAAATTAAGATGTTTGGTTTCCATCTGTCAAAAAAAAGTTATAGTGGTTTTATTTGTAGAGAGTCTGAACAAGTTTACACAGTGGCTTAAGAACTAAGTCCATCTTAAGTGTCATCATTGAAACCAAGCATACACACATGTGCATGCGTGCCCACTCACACATGCCCACCCCACACATACATACACACAGGGGCCTTGACCTGGAGATCCTAACAGTACAACATAGATACATGCATACAGAGATAGGATAAACATAAAATAAAGATGATTAAGTCAAATCATAAATTAAGTCAGTATTCATCACCTGTAAACTAGCTAAGCCAAATGGCAAAGAAGAATTTCTCTCTGGATAACTGCTATTTATCTACTTTTAGCTCTTCAATTATGGACCAAGACAGGGAGTGATCCCATGCAAGTTCAATCATCTGGATAATTTATAGGTCAATGACTGTATCATGCTCTGTCCTATCTCAGGCCTTTGAAACTATTGTTGCTCAGCATGGAATGCCTTCTGTCACCACTGTTCATTTAACTGCTACTCTATTTTCAGATTTGAATATTGAAGTCTTCCCACTTCACCCCACTGCCAGCCCCACTGCCACCCTCCTACATAACCCTCAAATGCCCCATGTTCACCCTAAGCTAGGAAATCCTTATGAACTAGGTTAAAATTACTAGACTCCTTGTCTCTTTACTCCAGTTCATTGGGATCAAGGGCTGTATGTTGTGCACCAGTACACCTAATGCCTGATTCCAAATAATCATAAAAGATTGTTCAGTACCTGTTAAGTGTATTAAAAGAATAGATATATGTAATTATTACTACTTTTAAGAGCACAAGCTGTAGAGTCACATAGTAGGGTCGTAACTTGATGCACATCCTCATTACTTGCAATCTTGGGCAAATTATTTAACATTCCTGTGCCTCATTTTCCTCATCAGTTAAATGAATACAATGATAGTATTTGCCTCATGAGATGTATATGATCCTAAATGAACTAATGCAGGTAAAGTGTTTAGAACAGTGCCTGGCACACAGATGCGAAAGCTGTTATTAATATTATGTCATATCTGCTTCTACCACTTCTTTAACCCCCACCTGCAATTTCTCTTTCTTTCACACTCAAGAAAACACAGAAATAAAAACAGATTTAAGAGTCAAGGCTATTTGGTAATCTCTTTAAATCACATTTTTTGCAGACTTGCTTTGAGCTCTTGGGGAGGCAACATTATTTTTTTGAAAAAAAAAGAAAAAGAAAACACTACAGGAGAAATGATTCAAGTCCCAGATTGGCAGTATCTACTTGAGAAGAGAGCATTCATTTGAAAGTGCTGGTTATCCTATCAACAGACTAGCTTTTAGACACATTGTGTTTAATTCCATGTTAAATTCCCAGCTTTGTCTTGAGTACCATAGAAAACTCATAATCTATCTGTGAGATATAAAGAAAAGCATACTGAAAGAGGAGTCAGGAAATTGGGCTCTGTAAGTATGTCTTAGAGAAGTTACAATTAATTTAAGCTTCATTAATGCATGAAATAAGGATGTTGCATTTGACTAACTAAAGTCTGAACATTTAATGATTCTATTTGAGATAGAAAAAAAGATTTTAAAGGTAGCATCATGTCAAGAGGAAAAAAATGGACAAAATGAATACCACTGTGAATGAAGATGGGTTGTATTAATAAAGAAAACGAGGTTTAATGGACTCACAGTTCCATTTGGCTGGGAGGCCTCTCAACCATGGCAGAAGGTCAAAGGCATATCTTACAAAGGCACATGGAAGCTGTCAAGGCTTGGGGCTTGCACCCTCTGAAGCCATGCCCCGAGCTGTAACTTCACCCCTTTTAGCCATGGCTGGAGCAGCTGAGACACAAGGCACCACATCCCTTGGCTGGACATAGCAGGGGGGCCCTGGGCCAGGCCCAGGAAACCATTTTTTCCTTCTAGGCCTCTGGGACTGTAATGGGAGGGGCTGCTGTGAAGGTCTCCAACATGCCCTGGAGACATTTTCCCCACTGTCTTGATGATTAACATTCAGCTCTTTGTTACTTATGCAAATTTCTGTGTCAGGCTTGATTTCTCCCCAGGAAATGGGTTTTTCTCTTCTATTGGATTGTCAGGCTGTGCATTTTTCAAACTTTTATGCTCTGCTTCCTCTTGAATGTTTTGCTGCTTTGAAATTTCTTCCACTAGATAACCCAAATCATCTCTCTCAAGTTCAAAGTTCCACATATCTCTAGAGCGGGGAAAAAATCCACCAGCCTCTTTGTTAAAGCACAGCAAGAGTCACCTTTGCTCCAGTTGCCAACAGGTTCCTCATCTTCATCTCAGCCCACCTCAGCCTGAACTTGATTGTCCATATCACTATCAGTATTTTGGTCAAAGCCATTCAACAAGTCTCTAGGAGATTCCAAACTTTCCCACATTTTCCTGTCTTCTGAGCCCTCTACATCTCTAGGAAGTTCTGAACTTTCCCACATTTTTTTCTCTTCTTCTGAGCTCTCCAAACTGTTCCAACCTCTGCCTATTACCCAGTTCCAAAGTTGCTTCCACATTTTCAGGTATCTTTACATCATCACCCTACTCCTGGTACCAGTTTACTGTATTAGTCTGTTCTCATGCTGTTGGCAAAGACATACCTGAGACTGGGTAATTTATAAAGAAAAAGAGGTTTAATGGACTCACAGTTCCACGTGGCTGGGGAGACCTCACAATCATGGCAGAAGATGAAAGGCACATCTTACATGGCAGCAGGTGAATAGGGAATGAGAACCAAGCTAAAAGGGTTTCCCCTTATGAAACCATCAGGTCTCATGAGACTTATTCACTATGGTGAGAAAAGTATGGGAAAAACCACCCCCATGATTCAATTATTTCCTACTGGGTCCCTCCCACAACATGCGGGAATTATGGGAGCTACATTTGGTTGGGGACACAGCCAGACCATATCATGCATCATGGAGGAAAGGAGTCAGCAAGAGTAAGTGAGGCAATCCTGGCTGACTGCCTCCATTTATTCACACTAGCTCTTGAGAGGGTAATTGATGTGAGTGGGTGGACAAAATTAGGGAGCTCATTGACTTTTTCCCCTAAAATGCATTTGGAAATAATCTATGTAGTGCTCTGATTTTAAAGAGCATTTGAACTCAGTAGTTTTGGCCTGGTTTTTAAAGAAGCAAATGGGCACAGACTGGAAGAAAAGACTGGGGAAGGACTTCAAGGGGATAGCAGGGAATAGGAATATGTCTCGAAGGCTACACACCAAACCAGAAACTGTGAGGAGGAGAGGATAGGCCAGTGACCAGCCTAAGCTAGAGTATCTCCAGTCTTTATTAGAAATGATAGAGATGATATTGAGATGATGAAGACAAAACCCTGCCAGCTCACTTCAATGTTAATGTCAGATTTTGAAAATCTAGATTAGAAAACTTATAGTTTATTGAGCAAGAGTGAAACAGTATGTAGCTCTTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGCATCACTCTGTCACTCAGGCTATATTATAATGGTGCAATATTGTCTCACTGCAACCTTTGCCTCCCAGGTTCAAGTGATTCTCGTGCCTCAGTCACATGAGTAGCTGTGATTACAGGTGTACCCCTCCATGCCTGGCTAATTTTTGTATTTTTAGCAGAGATGTGGTTTTGCCATGTTGCCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCTGCCTCCGTCTACCAAAGTGCTGTGATTACAGGCATGAGCCACCACAGCTGGCCAGATTCTTAATTAAATTTTTATTTTGAAATGAAATTCCTTATTCTAATTTTAGTATGCAGGAATAAGAGATGCAAATTTTACTTCTAAGGGCACTTATATTTGGAGTAAACTGAATCTGCAGTTCATATGACATACAGTTGTTTGTTTTTTAATTCTTAGGCACGAATTGGTTATTCATGTTGCCCTAAAAATTTTGATGTTTTTAAATATTTGCTAAAATCTTACTACATGTTGACTTTTAGATTTCATATATTATCTGATAACAACCATTTTTTAAAAATTAGGCTGATAACCATTTTTAAAAAATAGAGGTGGCTCATGCATGTAATCCCAGCACTTTGGGAGGCCAAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACAGGATGAAACCCCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGGCAGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCTGAGATTGCAGCTAGCCGAGATTGTGCCATTGCACTCCAGCCTGGGAAACAGAGCTAGACTCCATCTCAAAAAAAATAATAAATATAAAATAAAATAAAAATAAATCAATCTCTGTTGATATAAAATGGAGATTTTGTTGTTGTAATGTTACCAACTGCACAAGTAAGCATAAATATTACAGAACGTGGAGATTAAGTAGGAAGTATTAAAGGGAATCATGCTACCCAAGTCCTGGGTGTGCTACATGTGCTGAGGAGTCAGGACTTTGCTGAGGTTCACAGAGACAAGCCAAGAATTAATGAAAACAAACCAAAGTGCCATACAGTGGTAAGATGTAAAAGGGAACACTTCCTTTCTGTTACTACAGCTTTACCTATCACAGAGGATCGAGTGTATGTTAGGCAATTATAACTTGAATTCCTTAGAAAATCAGATCTTTACAGCTAAAAACATGCAGCTTGTTACAAATAACAATTAACAAAAACGACAAACACAACCAGTCAATGTGACATCCTACTAGTGGCTATCACAGTTTAAACAATACATATGTAAAGAAATGCCAAGGAAGGAAATAAATTTTAGATTATACCAAGAGACAAAACCCAATAAAGAGGAATGTGTACCTTTTCATGATCACAGATTTTAACTCTGAAACATATATATATATATAAATAAAATATATATATTTATACCTTATAAAGTATTCATATATATATAAATACTTCTGAATATATATATATATATATATATATATATATATAATTTGTTTATTTATTTAAATAGGGTCTCACTCTGTCACCCAGGCTGGAATGCAGTGGTGCAATCATGGCTCACTGCAGCCTGACCTCCCGGGCTCAAGTGATCCTTGCACCTCAGCCTCCCAAGCAGCTGGGACTACAGGCACCCACCACCATGCCCAGCTAATTTTTGTGAATTTTTGATAGAGATGGGGTTTCATCATGTTGCCCAGGCTGGTCTTGAACTCTTGGCCTCAAGCAATCTGCCCACCTTGGACTCCCAAAGTCCTGGGATTACAGGCACGAGCCACTGCACCTGGCCTTTGTGATATATTTAGTATATACACTTGCTAGTGTGTTATTTCCTCTATGAAAGTTTCTCTGCTTGAGGGCAAAGTCCAATCTTCTATTTGTTTTTTAATACATTCAGAGTTTTCCAGTTTGAGGATTTTTTCTAATAAAAATTCTTATCTGAATGTTAGACTTTTTCCTGTAAAGATGAGACAATGATGTCTGATGTTGCAAGTATTTTAAGTGTGTGATGGATGAACTGTTGTTAAGCTCACCAAGCATAGTAATAATTATAATTAATAAATTTTAGGAAGTGATAAATTTAAATATGAAAGAATTAAAATCCCTTCTGTATTTAGAACTTCCATGATTTTTCTCATGGAGTTTCTGCATTAATTCTATGCTGCTCCTCAGGGTAGATATCTTGCTCATATTCAGAGAAAACTTCTTTTTCTAAATGCTTTTTTATGAAGGAAACATAACGTGATACAATAGTAAGAAATGAAGTACTTATTCAGGGCTTACTGATGGATGAGATTAATTTAGAGAAGAAATATAAATAGAAGCAGACTAATCATGTGTATGTGAGACCGTTTCCACATGAGCTATTATGCAGAAGGTACCATTTTGGGTGAGGGTTTGTGTGAACTCCTCTGAGGGCAGAGTTTATTGTTTCAGCTGTTGGTTGCTGAGAGCTTGAGGGCCCTGCCCTCTGTTCTTTGTCTTACTAAGAGCATGCTGACCTGACTGATTACTTCATATCAAGCCCTCATTCTTGGAATGTTCTGTAGAATAATCATATTTGTAATCCCTGTAGCACAGTGCAGCACACCTTTATTTCCTGGTGTATGGTTTTGCTGGAACTCAAAAGACAGAGTTGTTATTTCAAGGACAACATATTTGCTGAGTTAGGTGGTGATGGCTTCCACAAGGATGCTATTATCTCTGAACAAGGACACATTTATTCCAACATTGGAGCTGCCTATCATGAAATGAGTCTAAAGATAGTTTTCACTGATGAGCATTTGTAACCTTTGGTGTTTTTCACATAGCACTCTCTAAAAGCTCCAACAACTGTAGCTCCTAACATTAGGAGTTTATGAGTTCCAATTAACAGTCTTCTGTTACCCGTACATTTAAAAGCCTAACATTTTGATGCCTTTATTTTTCTTTCTGTGATTTCTCCTAAAGATTAAAAAAATGATCTAACAAACACTTGTTGATTATGAGGACATGATGATATATAATAGTTCATTCTCACCCAGTACAAACATACAGATTTTGTACCCTGCCCTTAATGAGTCTCTTATTTGCTGCTTTGTGTTTTTAG
Seq C2 exon
ATGACTAAGAATGGCACAGTAGAATCAGAAGAAGCCAGCACTCTTACACTGGATGACATTTCTGATGATGACATTGACCTGGACAACACAGAGGTAGATGAGTACTTCTTCCTACAACCTTTGCCAACAAAAAAACGAAGAGCTCTGCTGCGTGCCTCTGGAGTGAAAAAGATTGACGTGGAAGAAAAGCACGAACTCCGAGCCATCCGCCTCTCACGAGAGGACTGTGGCTGTGACTGCCGAGTGTTCTGTGATCCAGACACGTGCACCTGCAGCCTGGCTGGCATTAAGTGCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000178662:ENST00000342316:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.424 A=NA C2=0.081
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development