HsaINT0185859 @ hg38
Intron Retention
Gene
ENSG00000106261 | ZKSCAN1
Description
zinc finger with KRAB and SCAN domains 1 [Source:HGNC Symbol;Acc:HGNC:13101]
Coordinates
chr7:100030249-100041689:+
Coord C1 exon
chr7:100030249-100030375
Coord A exon
chr7:100030376-100033304
Coord C2 exon
chr7:100033305-100041689
Length
2929 bp
Sequences
Splice sites
5' ss Seq
AGGGTAAGA
5' ss Score
9.21
3' ss Seq
TTTTCTATTTATTATGTCAGGTG
3' ss Score
7.86
Exon sequences
Seq C1 exon
GCAATGGTGAAGATCGAGGACATGGCTGTGTCCCTCATTCTGGAGGAATGGGGATGTCAGAATCTGGCTCGGAGGAATCTCAGTAGGGACAACAGGCAGGAGAATTATGGGAGCGCATTTCCCCAGG
Seq A exon
GTAAGACGGATGCAGGCTTACTGTCTGATAAGATGGTTTTGTCTCTCTGTGTGTTAGCTGTGGGATCTCTGATGTGTTCAATTGAGTGTTGAGGAGTTAGAGACTACCTATCCCCTTTTGTAGACCAGATGGAAAGTGAGAATGTTTGTGTTCATTTAACTCCAGAAGCATGGTACTGTGACCCTGATTCCAGGTGGGTTTTTTATTGCTAAGTAGTTTTTGCTCTTTAAAATCAGAAATAATTGAGTTCCAAGTCCTCACCTCTTCAGCCACTCAGTTGCCTGGGAGGCAGTTCTGCTCCGTTCCCATGGATTACAATTTAGGTGCCTCTGTCGGGGGAATATCTTTCCTAGCAGAGATGACCAGGCGAACTGATCATCCGTCTAATCCCAACCCATTGTCCCGGTACCACATTCCCGAAACTACCAAGCATCCTTCTGTTGGCTTTCTGTCTTCTTCCATCCTGTGTGATTAGTGTGATTCCAATACACTGCTTTGTGTAATTCCACGAACTTGCACCTGGACTGTCCTTGTGATGAGGATTCCCAGCTTCCAAACTTAATGGTGATTTTCTATGAAGAGCTCTGGGTCCTGGATGTGTAGTAAGAACGAGGAAGTTCAAGAGGCATCAGCCAGATAAGACAAGGTGACACTGTTGGCAGACATTTCCATTTGTCTCTGCTGGATCTTAACCCCTCAGGACAGTGCTGCAAAGAAGCCCTCACGTGAGTACAGCAATAGGGAGGTCCACAGCAAGCTTCTACCTGGAGAGGGCAAAGGGAGTGTGAATAAAGCGTGAACATGAAGGATGTTACTAATGAAACATCAAGTTCTATTTTTGATCAGGCATAAATGGGGCTTATAATTTCTCTTGGTACTTGCTCTTTGTACTAGATGATTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTGCTGTTTCCCAGGCTGGCATGCAGTGCTGCGATCACAGCTCACTGCAGCCTCGACCTCTCAGGCTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCTGGGACTACAGGCATGCATCACCATGCCCAGCTAATTTTTACATGTTCTGTAGAGAAGAGGTTTCGCCATGTTGCCTAGGCTGGTCTCAAAACCCTTGGGCTAAAGTGATCCACCTGTCTCCACTTCCTGGAGTTCTGGGATTTAACAGGAGTGAGCCACTGCACCTGGTCTCCAGCATTGTTTTCTGTTTCTTTTTTGTTCTGAGTTATTCTGTGTCAGTCAGTGAAGGGTTTAATTATTTTTACTAATGTCGTAACCACTTTTTTCCACCTACTCCTCTGTTACTTGAGCACTGTCAGCTCTGTGTTCCTCTCCTTGTTGGATAGAAACTATTTCCTGTGTCTGAAGATTCCTGTAGCCTGCCAGGTTCAAAACAAGTTCCTTGACCAGGCACAATGGCTCACACCTGTAATCCCAACACTCGAGGAGGCTGTGGCAAGAGGATCGCTTGAAGCCAGGAGTTCAGGACCAGCATGGGCAATATAGCAAGACCACTGTCTCTACAAAAAAATTTAAAAATTAGCCAGGCGGGGTGGTGCAGGCCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGATCGAGGCTGCAGTGAGCTGTGCTCATGCCACTGTACTCCAGCCTGGCTGACAGAACAAGACCCTGTCTCAAAAACAAAAACAAAACAAAGTTTCTTGTTTGTTAATCATCAGCTTGTTGATAGAAAACTCACAGAATTGGAGAAATATTTACTATTCCTTTCTTTCTGCTAATACCACTAATCATTTTCTATGAAAGACCTGTTCTTTTTTTGAACTTATGAATAATGTTAGAAATGGAACATGATGTTTTAAATGTATACATAAACCTTCCAATTAATTATCAGGTGATCCAGTAGTAGACCTGTGACCTCTGAAGGCTCCTGCTTCTCATCCCTTCCCTTCTGCTGTGATTTGTTGTCTTCCCTCTGCTCATTCCCCTTGTGTCTGTTTCTTCCATCCTCTCCCCATGCTCCCTCTGTTGTCATTTCCCCTTACTCTCCACTCTTTGCCTGCGCTCTCATTTTCCAAATTTTTGTTGTTCCAAAACTAGGACAACAGATCTTCCTGTTGTCCCAGTTTTTCCCCTTGTTTTTCTCCTATTTTATGTCCAATTAATATTGTGAAGTCAGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCATCACTTTGGGAGGCCAGGGCAGGTGGATCACCTGAGGTCAGGAGTTTGAGAGCAGTCTGGCCAACATGGTGAAACCCCGTGTCTACTAAAAAAATACAAAAGTTACCCGGGCGTAGGCCAGGCGTGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACGAGGTCAGGAGATCGAGACTATCCTGGCTAACATGGTGAAACCCCGTCTACACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTCAACCTGGGAGGCGGAGCTTGCAGTGAGCCGAGATCACGCCATTGCACTCCAGCCTGGGTAACAGAGCAAGACTCCATCTCAAAAAAAAAAAAAAGTTACCCGGGCGTGGTAGCATGCACCTATAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGCAGTGAACTGAGATCACGTCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCTGTCTCAAAGGAAATAAAAATAAAAATATTGCAAAGTCATTTTGCAGCCGTGTAGAAGCTTCTCGGGAAACTGTCGCTTGACCCACCTGTATATTCAAAAGAAAAAGGTGCGATTTGAATTTTCTATTTATTATGTCAG
Seq C2 exon
GTGGTGAAAACAGGAATGAGAACGAGGAGTCAACCTCAAAGGCTGAAACCTCGGAAGATTCAGCATCACGCGGGGAGACAACAGGAAGATCCCAGAAAGAGTTTGGAGAGAAACGTGACCAGGAGGGCAAAACAGGAGAAAGACAGCAGAAAAACCCTGAGGAGAAAACCAGGAAAGAGAAAAGAGATTCAGGGCCAGCTATAGGAAAGGACAAAAAAACCATCACAGGAGAGAGAGGTCCAAGGGAGAAGGGGAAAGGATTGGGAAGAAGCTTCAGTCTGAGCTCCAACTTCACCACCCCTGAAGAAGTTCCCACGGGAACAAAGTCTCACAGATGTGATGAATGTGGTAAATGCTTCACGAGAAGTTCAAGCCTTATCCGCCATAAAATAATCCACACTGGAGAAAAGCCCTATGAATGTAGTGAGTGTGGGAAAGCCTTCAGTCTTAACTCCAACCTTGTCCTGCATCAGAGGATCCACACAGGAGAGAAACCTCATGAATGTAACGAGTGTGGCAAGGCCTTCAGCCACAGTTCCAATCTCATCCTCCATCAGCGCATCCACTCTGGAGAGAAACCTTATGAATGTAATGAGTGCGGGAAGGCCTTCAGCCAGAGCTCGGACCTCACCAAGCATCAGAGAATTCACACGGGGGAGAAACCCTATGAATGTAGTGAATGTGGAAAAGCTTTCAACCGAAACTCATACCTGATTTTGCATCGGAGAATTCACACTCGAGAAAAGCCCTACAAGTGCACTAAGTGTGGCAAGGCCTTCACCCGCAGCTCCACCCTCACTCTGCATCACAGAATCCATGCCAGAGAGAGAGCCTCTGAGTACAGCCCAGCCTCCCTTGATGCATTTGGCGCGTTCCTGAAAAGTTGTGTGTAAAGGAAGAATTTGCCATCAAGCCATTTCCCCCTTTTGTTTCTAAAATTATTTCAGAGATGTGTGCTCCTGGAGGGAAAAAGAAATACAGCCTCAACAGATTAAAAAACAAAAGTCACACTTAAGGATCCTTCTAGTCACATCAGCAGTGTTCTGCCTTTATGTAGTAGTTGGGCATATAATCCTTCCACACAGCCCCTGCAGGGAAAGGCTAATCTTACGGATAATCCACGTGAGATTTCCACACAAGAGAAAAGCACACGCATAGTGAAATGTCAGTCTTTTCAGTAATGAGGATACCTTTAAGGCACTCTTGGACTCTCGGCAACCACAACATAATAGTTGAAAGATCAAGATTGGCTCCACGAAAGTGATACGGAGGTTAGGATGCTACTTGCTGCAAACAAGCCCTACTTTGGCCAACATCCTGCTTATTTCTCAAAAAAGAGGGACAGTGAAAACAAAAACGACATTGGGACATGCTGCTCAAGGTAGTTATATATACGATAAGTTGTATATATGATCACTGGTAGCCTACCAAAGCTGTAGAAATCTAGGACTGTGCTAATCAGTATCAAACCAAAGATTTCTATCTCTTCCCGAAAGAGAGGGTATGTGCACCAGTCTACAGTTCCAAAGGACTGCAACAAATGTAGATGGTTCTGTCCTCATCCCTGAGATCAGTTCTACTGAAATGGCAACAACAACTCCAAATACATCTCTCCCTTCTTGAAATCCCTAAAGCACTATCGCACTCCTAAATGCATTTCTCCACAAGTTAGCACTTGATTGTATACTGTCTTTTAATCCTTCATTGTTTCATGTATGAAGTTTTTAATCACCCCCTAACCCCCAAAAAAGATTCGGTTGTCAAGGGATATATTTCTATCCCTGCCAGCACAGTGCTGGACATAGTGAGTACTGAACACCTAAGAGGCACTCATTCAGACTGACTTCTACAGGACTTCTACGTGTGTGATAAAAGCCTGTGAATCGTGAGTCCCTGAAATATGGTAGCCTGGCCCAGCTTCTAAAGAGGACCTTCGTAGCCACAAGGCATGCTAAACCTCTAGGGTCTGATGCTGTTTTTGTTCCAAATATAAACGAAAGGCACTAGTCAGCCGCCTGCATAGACTTTCTAAACAGTGAGTAAATACCATGGAATGTCAGAAATGACTTTATCATCGTCATCTTGAAGAAAAATATGAACACTGATGAAGGTCATTTTTTTTTTTTGACATCTTTCTGTGGCAAAGCTCTTAGAATTCTTTGCAGTTAGCTGCTGAACAGTATGATGATTTGGGGATTTTCTGAATCATTTGTACTTAGATACTGGAGTTCAGAAGATGTGATTTTTGTTGCTTTTCAGAAAAAGGAACGTGGTAGGGAGTGTTTTTTCCCACGCTTTTCCAGTAACTTTGCAAAAGCATTAATTGTTCACTGGCAATTACTAAATGTATTTTGTTGCTCTGAGAAACTCAGCAGTGTACTGAGATGTGGCTGGCTGTGCCATCGTCATAGTGCACAGTGACTTTTCTGTTTCTTATCACTAAAGACTGAGGTGAGGTTATGAAACTTTCATTGGTCCCATCGTTGTGCGCAGGGTGCAACTGGCTACCTAGAAGCTGATGGCAGGAGACTGTTTCACACACAGGAGATTGTGAGCTGTGTAAGTAGTCATCGCCACTCAAGTAGGACAAGGGTCCTACCCAAGGCTAGGACCGCCCTGCGGAAACAGAAACATAGACTGAGAACAAACCTCAAGACTATCAGTGTGACCTCCCCATAACAAGAGAACCCCATATATAGTTTGAGACTTTCCCTTGAGAAACTTATACTAAAACTATTACTCATCAGTCATTCACTGATCAGCAGCTAAAGTCCATGAGACCAAATGGTTTTATATGGAACCAACGAAGTGGGAGCTAAAACTGCACAGTGGTCATTCTTTGGCCTCTCCTTGGCTTTATGACTTAAACCAACTACAACTTCCCTATAGCTTCTAAGCAGTTTCATCAGCATTACTTGGGAAAACGTGTTGCAAGTCAACCAGTCACTAGGATATTTCTACCCATGCAACGGAAGAAAAACCCATTACTCCAGAAGAGTATATCTAAGTAACTAAAATGGAGGCAGAAAATGTTTTAAGGATTTTCTTCAAAGAATAAGCCACAGCAATGGTTTTGTAGAAAACTCCTGTGCTTTTGAGCAAGGACTTTTGCCCTCTAGAAAGCAACTGAGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGAGCGGATCACCTGAGGTCAGGAGTTTTGAGACCAGCCTGGCCAACATGGTAAAATCCCGTCTCTACTAAAATTATAAAAATTAGCCGGGCATGATGGTGGGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATTGCACACTGCACTCCAGCCTGGGTGACTAGCAAAACTCCATCTCAAAAAAAAAAAAAAGAAAGAAAGAAACTGAAAAGTGAGGTGTGGAACTCCAGGCAACGACCCAAGCACTTATTTTTTAAGAGGGAAAGGACTTTGGTCATGTTTACATTGGCCTTTGGTTTTTTTTTTTCTTTCAGCCACAACTATATGCTGATATAACTCAGCCATCACTTTTGAGTTTTGTTTTTAAATGAAGGTTAAATGTGACCTGTGCCCTCACATTTAATTCCGTTTCATGGAGACATCTTCCTGACTTTGTTGGATAGCTGCCACTAGGGTTGCTTCGATCTTCAGCCACATGCTGTCCTTGAAGCAGCTATTTGAAGATGTGTTTTCTGAGGAAAACAGGCTACAACTGTTTATTAAAACCACTTGCAGTGCATTCGTTTATCAGATGCTCAGTGCAAAGTGTAATTGGGTCATGGTCAAAAACGCTTGCAACATCTAATTGGCGTTCAAGATAGTCATTCAAAAGTTCTTGGCCCGCTGAAGTCTGTTAACAGTTGAAACATTCTACAGTTAACCATTAGCATGCTAGTTGTCCTAATGGAAATTTTTGAAGAGTTTTTCAATATATACCCTACCCTTGCCAGGAAGAGAAGTAAAATCCTCAGGTTGTGGGGTATTTGTTTCTACTCCAGCCTGGCAGGCAAGGCTAAAACCTGAGATTATCGATCTATGAGACATCTTGATATGTAAAGCACTTAATATTAAAGGCATAAAAGTGAAACTGCTAAATATGTATAGAGAGGTTGACGTGTGATACGTGGGACAGTTCACATAGACATCAGAGAATTTATTCCAGAAAGGAGCCTCCTGAATGTGATGAATACGGCAAAGCCTTTAATCACATCTCAGCCCTTAGCATCGGAAAGCTTATACTGTAAATAAACTTGATGAATATTATATGTGAGGAAAACTTTCATGTATAGCACTCATTGCTTCAGACAGAAAATGAATTCCGTCGGTATGTTCCAATCGTGATGAATTTGAGAAACATTGCAAGAGGGAGCTCAATCTTGGCCGGGCGCCGTGGCTCACGCCTGTAATCGCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGTAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCTTGTCTCTACTAAAAATACAAAAAAAAATTAGCTGGGCACAGTGGCGCACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCTTGAACCTGCGAGGCGGAGGTTGCAGTGAGCTAAGATCATGCCACTGGCACTCCAGCCTTGAGTGACAGAGCGAGGCTCTGTATCAAAAAAAAAAGTTGCGGGGGGGTGCTCAATCTTAACTGCAGAGGATCTACAGATGAAAAAAAATGTGGGGAAATGCTTTAAAAAAATAGCAAAATGTGCAACTTCTTACAAAAATTGTTAACGTTAGGTACTTCTATATATTTTATATGACCATAATGTCCGTGTGTGTTTTGTACCTTCAGTCCCTTGTTATTGTTCCGTATATTACCTGTAAGCAGATACTGTATTTTATTTTAGCCTATTTGACAGAACACATCACTCAGAAAAAGTGAAGTTTCAGAGCAAACAGTGAAGAAATCAGTGTGATTGTAGACAAAAAGTCGGTTCACAGAACGGAGCAGCGGGGAGAGGAAGGGAAAAGCTTCATAGTTTGGTGCTTATCACATCAAGAGATTGGTAAATTTCTGAGGAAAGACAGGCTAATGGGGCACTGAAATGGAACAACTCCTTTAAACGTGCAGCCTTTTGAATTTTTCCTCAAAACCAAGAAGTTGACCTCTGAGCTGTCAGGTGACCACTGTGTGCAAAGGGGATGGATTCTCTTGTCAGTAGACGGTCTTCTCCATGAAGCGAGAGTAGGAAGTGTACTGGAATGGCCAAGTGGGACTGCTTCAGCTGACCAGGTTCTTTTAAACCGTAGTCATGCTTTCCCACTAACTCTTAAATCCTTATGCTTAGAAAATTGAGGATAAGGCTGGGCACAGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGAGACCAAGGCGGGTGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGCGAAACCCCGTCTCTACTAAAAATACAAAAAAATAGCTGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGGATCACTTGAACATGGGAGGCGGAGGTTGCAGTGAGCCAAGATGGCGCCACTGCACTCCAGCCTGGGTGATGGCGTGAGACTCCATGTCAAAAAAAAAAAAAAGGTTGGGGGGAGGATAGGACTGGCCAGGCACGGTGGCTCACTCCTGTAATCTCAGCACTTTGGGAGGCAGAGGTGGGCGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACGTGGTGAAAGCCTGTCTCTACTAAAAATACAAAAATTAGCCGGGCGTGGTGGTGGGCGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCACCTAAATCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCACTGCACTCCAGCCTGGGTAACAGAGACTCTGTCTCAAAAAAAGAAAAAAAAAAAAGAAAGAAAGAAAGAAAATTGGGGATAGGAGAACAGCAAGGTGGGCATTTCCCGGAATTGTGTGCAGATGCATCCAGTCGTGGCATTGCAAGAAGTCTGTCTGATGAAGCTCGGGAAGCATTTTGCAATATTCCCTTTGGCTGTGTTCCTGTGTTCCCTGCTCCCACTTTTCTTCCCCTGGTTTGTGATTATTAGGAGAGAGGTTTTGCAAAGACTCGTTGCTGTGAAAGAATCTTTTTTTAATTTTTATCCTAGAGTCAGTCACTTTTATTCCAGGTAGTCATGCTGATCTGCTTATCCAAAGCCAGCTAACCAGGTTCATCCTACCATCCTCATGGAAGACTGTGTGTATGAATTGGAGTAACAGAACTGAAATACACTTAAACAGTGACAGCAGTACTTCCCAGGGTGGGGGCCATATTTCTCTGTGTCCTACTCTGAGCAACTTCTCAGAGATACGAGGGGGCTAGGGTTTTCCCATCTGGGAAATGGGGTGAAAGTCTGCAGATTGTTAAATGAAATATAGAATCAGAGAAAAAGAAAAGTCAGTGATATAAATAGATCATTTCATAGAAATTAGGGTAGATTTTTATTTCAACTACTACTGGAGAATTTAATAAAAGGCATTATTTGAAAAGTTTTTCTAACATAGATTTAGGGTTTTTTTTTTTAGAGTGGACACACTACATTTAAAAGCAATTATTTTGCTATTCAGATTTTTTATTATCTGAAAATGAAATTATCTGTTTTACTTTTCAAAGCTTTGTGAAACAAACTTGAAGTTATAGGGAGGTAAGCCATCTCCAACTCTGCAGGTCAAACGAAAGTTTGGGAAATACTTTTGACATCCCACAATACAGAATGTCTTAACATGAGAATTGAATTTCATGATGTGTGGTTCCATTTAATAGCGGACACCACCCCAATCTCATGTTTTCCTGTTACCCTAAAACAGTGGAAGGAAACTGGGTGTTTGGTAGACTTCTAAATCATGGTCTCTGACAATTTGAATCTGAGATTCTCACCTCCATTTACTAAAGAATCGTGACTTAATTCAAATTGCACAGTAATCAGTAAAGTGAATACGTTTTTAAAATGGAATTTTCTCCCTTCAGCAAGCACTCATTAAGGAGTGAGGCTGAGTATTTTAAGATAGAGTGAGATCTGTGAGTGATTGAAAGGTGATATTTAAAAACTTGGATTTCATTCCAGTGTCAGGTTTGGGTTTTAAGTTCCTTTGGTCCAGGGAAGGGTCCAAGCAGCCACAGTTGCCCTAAATCTCCATCATTAAGTCTTCCAGCAAGGTTAAGTGCAGTATGGAAGGAGAAGGGGGAAGAGGACGGTAACGGCCCCACACTCCAGGCTGAGAAAGAGTAATTAGGAGGCCTGAGGAGGGGCCGAGGAAAGGCTGTTGGGGTGTGCTGGGGTTGGTACCCGAGCGCCTTCCCCTCACCTCAACCAGAGAAGAGCATCCGGTTGCTTTTTAAAGCTTTTAGCCTGCCCTAGCAAGGACAAAGCATGTTAGATTAGAGATGCTTCTGCTGATCGCAGGGGTTCTTATTTGAAAACATCTATGATGGGGGTGGGGTGGGAGGAGACAGGTTGTGGTTATGCAGGAAAATCTTGTCCTAAAAATATATGAGTTTGGGGGTAAGGGGTGGGATAGCCAAGCAAAATCAGTAATTATTTTAAAATGAACATATGTATTTTTATTAACTTTTAGTTAAATACAGATTTTACAACGAGGTCAGCATAAGCCTAAATCTATATAGAGGGCTAACTCAGGCATTGTCTTGTTTATTTGTAGACTGGATTAAAAACAACCTGTCCTGTTTTGTCAGTTCCCAGCTTCTTCGTTTAGAATAAATTAGACCAAAAGAAGAAACGTGCTTGTCTCTGTATACCCGCAGAATGAAGTTACTGTTGTTAAAACTGGATTTTTTCATTTTACTAGGTTCCGAAGAGTCCAGATGCTTGGTAGATGTTCAATACGTGATTTTTTTTTTAATTGAATGTGTTCATTTAAAATCCTCCTTAACATTTCTAGAAAGACTTCTTTCAATAAATAATGGAATCTTAGAGGAAAAGTGGTTTTTTAAAAGCTAGGGAACTCCTCCACTAAAAGTAACCATTGGAAACCTCGAATGAGGGCTAAAGTTTTAATCATAAGAGAAAAGGCAGCATAATGAAATGTGTACACATACATAGTCAGTGGTCCATTTTAGGAAGCCAGTGGCGTCTGATAAAGAAATGTTAAGAGTAGTGAGGTTGAGGAAGGAAATTGTGGGGATTTGAAATATTCTCTTTATGTTGTTTCTCTTCTGAGTCATGGTAAAACAATAAATTATCATCTCTAGGTGGCA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000106261:ENST00000324306:5
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.616 A=NA C2=0.387
Domain overlap (PFAM):
C1:
PF0135222=KRAB=WD(100=95.3)
A:
NA
C2:
PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=8.4),PF134651=zf-H2C2_2=WD(100=8.7),PF134651=zf-H2C2_2=WD(100=8.7),PF134651=zf-H2C2_2=WD(100=8.7),PF134651=zf-H2C2_2=WD(100=8.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains