HsaINT0186192 @ hg38

Intron Retention

Gene

ENSG00000131849 | ZNF132

Description

zinc finger protein 132 [Source:HGNC Symbol;Acc:HGNC:12916]

Coordinates

chr19:58432814-58437215:-

Coord C1 exon

chr19:58437047-58437215

Coord A exon

chr19:58435212-58437046

Coord C2 exon

chr19:58432814-58435211

Length

1835 bp

Sequences

Splice sites

5' ss Seq

TTGGTAATG

5' ss Score

4.83

3' ss Seq

TGGCATTTCTCTACTTTCAGGTT

3' ss Score

10.13

Exon sequences

Seq C1 exon

CATACTTCTTGGCCCTGTGGCTCAGCTGTCCCCACATTGAAGAGCATGGTAACCTTTGAAGATGTGGCTGTATACTTCTCCCAAGAGGAGTGGGAGCTCCTTGATGCAGCCCAGAGGCACCTGTACCACAGTGTGATGCTGGAAAACCTTGAGCTTGTGACCTCACTTG

Seq A exon

GTAATGCCCTGTCTCAGCATGGTGATGACTACCTTATGCCTTGTGTCTTTTCCCCATAGAAAGCTCTGTTCATCCCAAAGCCAGATCATGGGTACTGCTTCCTTCTCGGGTTTCCTGTTGTAGGTGCTGGGGTGCTGAGGTTCTGCTGTGTGTACTTCCCCTGTCTCTCTCTGAGCAGCCTCATGAGCTTTCCTAATAGCTGTTGCCCAGGAGCCTTGTGGAGGCAAAGGTTGGGGATCAGACACCTCCAGTCTGCCTAACAGATCCCACTGAGATTCACCAATCCCTGGTCGGGTTACCCAGTATGAGGTCATGCCCAGATTCTGTCTCTTTCCCAATGAGATTTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTTACTGCAAGCTCTGCCTCCCAGGTTCACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGCCTGCCACCACACCCAGCTAATTTTTTTTGTATTTTCAGTAGAGAGGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCTGACCTCGTGATCCACCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCCAGCCCCCAGTGAGATATTTTTTAAAAACAGCTTTATTAAGATAAACCATACAATTCACCTTTTAAAGTACACAGTCTAGTGATTTCTATATGTTTTCACATGGTATAATCATTGCTATAATGTAATTTTAGCATGTTTTCATCACCTAAAGAGAAACTGTAGGTCCTATTAGCAGTCCCATTAGCTGTCACTCCCCATGTTCCCTTATCCCTTTCCCCCCGGTCCTAGGCAACCACTAATCTACTTTCTGACTATATAGATTTACGTTTCCTAGACATTTTATAGAATACTATGTATTTTTCTGTGACTGGCTTTCTCTTAGCATGTTTTTGAAGTTCATCAATGTTGTAGCATGTATCAATATTTCATTCTTTTTTATAGCCAAATATTCCAGTGTATAGAAAGACTACAGTTTGTTTATCCATTTACCAGTGGATGAGCATTTGGCTTGTTTCCATTTTTTAGGTGTTAGAAAAAAATGCTGCTATAGAAGCTGGGCAAGGTGCCTATAATCCGTCTACTCAGGAGGCTGAGGCAGGAGGATCACTTGAGCCCAGGAGTTTGAGACCAACCTGGGCAACATAGCAAGACCCCATCTCAAATTTTAAAAAAATTCTGCTATGAACAGTCCTGTACACATTTTTGTGTGGATGTTTTTAGTTCTCTTGTGTAGCTCTGTAGAAGCAGACTTGCCAAACTGTTTTCCAAATTGGCTGCACCATTTTACATCCCTGTCTGCAGTGTATAAGTGCTCCAGTTTTTCTACTTCATTTGTTGTCATTTATTTTTTTTTATTATAGCTATGCTAGTGGATGTGAAGTGGTATCTCATTATGGTTTTGGTTTTCATACTCCTCATGTTTAAGGATGCTGAACTTCTTTTCATATGCTTATTGGCCATTTGTGTATATATCTTCTTTTAGAGAAATGTCTATTTAAGTCCTTTGACCCATTTCTGTGTCCTTACCCCTGGTGAGGTCTCCCTTATTCTGTTGCTTGGCTGGTCCCTATCCTGCCAATAGTAATGGGCCCTTCTTCACCCTGATGATGGCCCTGTTGGCCTGTCAGCAATCCCTGGGACCTCTTCTTGGGTGTGAATTCCTGGGTAACATTTCTAATGAAGTCAACCATTCCCACCAAGTGGAATTCTTAGTTAACTGGCATTTCTCTACTTTCAG

Seq C2 exon

GTTCTTGGCATGGAGTAGAGGGTGAGGGGGCCCATCCCAAGCAGAATGTTTCTGTAGAAGTGTTACAGGTCAGGATCCCTAATGCAGATCCTTCCACCAAGAAAGCTAACTCCTGTGACATGTGTGGGCCATTCTTGAAAGACATTTTGCACCTGGCTGAGCATCAGGGAACACAGTCTGAGGAGAAACCCTACACATGTGGAGCATGTGGGAGAGACTTTTGGTTGAATGCAAACCTTCACCAGCACCAGAAGGAGCACAGTGGAGGGAAGCCCTTTAGATGGTACAAGGACAGGGACGCACTTATGAAGAGCTCTAAAGTCCACCTGTCAGAGAACCCCTTCACTTGCAGGGAAGGTGGGAAGGTCATCCTGGGCAGCTGTGACCTCCTCCAGCTTCAAGCTGTTGACAGTGGGCAGAAGCCATATTCCAATCTTGGGCAGCTTCCAGAAGTCTGTACCACACAGAAACTCTTCGAGTGCAGCAACTGTGGAAAAGCCTTCCTGAAGAGCTCCACTCTCCCCAACCATCTGAGAACTCACTCTGAAGAGATACCATTTACATGCCCAACAGGTGGAAATTTCTTAGAGGAGAAATCAATCCTTGGTAATAAAAAGTTTCACACTGGGGAAATACCCCATGTGTGTAAGGAGTGTGGGAAGGCCTTTAGTCACTCATCTAAGCTGAGGAAGCACCAGAAATTTCACACTGAAGTAAAATATTATGAGTGCATTGCATGTGGGAAAACCTTCAACCACAAACTCACATTTGTTCATCATCAGAGAATTCACTCAGGAGAAAGACCTTATGAGTGTGATGAATGTGGGAAAGCCTTCAGTAACAGATCACACCTCATTCGGCATGAGAAAGTTCACACTGGAGAAAGGCCTTTTGAGTGCCTGAAATGTGGAAGAGCCTTCAGCCAAAGCTCCAATTTCCTTCGGCATCAGAAAGTTCACACACAGGTAAGACCTTATGAGTGCAGTCAATGTGGTAAATCCTTCAGCCGAAGCTCTGCTCTCATTCAGCACTGGAGAGTTCACACTGGAGAAAGACCGTATGAATGCAGTGAATGTGGAAGAGCTTTTAACAATAACTCCAACCTTGCTCAGCACCAGAAAGTTCACACCGGAGAACGGCCTTTTGAGTGCAGTGAATGTGGAAGAGACTTCAGCCAAAGCTCCCATCTCCTTCGACATCAGAAAGTTCACACTGGAGAACGGCCTTTTGAATGCTGTGATTGTGGTAAAGCCTTCAGTAATAGCTCCACCCTCATCCAGCACCAGAAAGTACATACTGGGCAAAGGCCTTATGAGTGCAGCGAATGTAGGAAATCCTTCAGCCGCAGCTCCAGCCTGATTCAGCACTGGAGAATTCACACTGGAGAAAAGCCTTACGAGTGTAGTGAGTGTGGGAAAGCCTTTGCTCACAGCTCCACTCTCATTGAACACTGGAGAGTTCACACAAAAGAAAGGCCTTATGAGTGCAATGAATGTGGGAAATTCTTTAGCCAAAACTCCATTCTCATTAAGCATCAGAAAGTTCATACTGGAGAAAAGCCTTATAAATGCAGTGAATGTGGGAAATTCTTTAGCCGAAAATCCAGCCTTATTTGTCACTGGAGAGTTCACACTGGAGAAAGGCCTTACGAATGCAGTGAATGTGGGAGAGCCTTTAGCAGTAACTCCCACCTGGTTCGTCATCAGAGAGTTCACACACAAGAAAGGCCCTATGAGTGCATCCAGTGTGGAAAAGCCTTTAGTGAAAGATCTACACTTGTTCGGCACCAGAAAGTTCACACCAGAGAAAGGACTTATGAGTGTAGCCAGTGTGGGAAACTCTTCAGCCATCTTTGTAACCTTGCACAGCATAAAAAGATTCATACCTGAGTGGAGCCTTATGGAAGTGGTCTTTGTGAGAAAATCTTCAGCCAAGTCAAACTTCATGCAGCAGAATCCCCATACCAGAAAAATTACCTACATGTACTGCTAATGTGGAAAAGCCTTCAGAAGCTACTCTGTTTCTGACCAGCCCAGGAACCTTTGCAGGGCCATCTCACCCATGCAGCATAAGGCAGAAGCCATAGTCACTTTCCATCTTGCCTGGATCCAAAAATTTGCAGCAGTCCTGTCCTCATGCATGGGGAAAACAGTACCCTGAGCCTTCCTTCCTGTGTTCTCTAGGGATTCAGGACTGTGCTCAGCTGAACCGATGCTGGTTGAGGGGCCTTGAGGGAAATCTAATTTGAGCTCAGGAAGATGCACATTCCTTGTGGATGTGGTCAAGTCTGTGTTTAACCCCTAAGATGTGTCCATTGAGGCCACAAATCACCCTCCACTGGAATCACCTACCTTGCCTGCACTAACTGGTGATAATAAAGACCTTATTGATCAGGTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000131849:ENST00000254166:2

Average complexity

IR

Mappability confidence:

NA

Protein Impact

Alternative protein isoforms

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=NA C2=0.041

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=71.9)

A:

NA

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.1)

Main Inclusion Isoform:

NA

Main Skipping Isoform:

ENSP00000254166