HsaINT1041055 @ hg38
Intron Retention
Gene
ENSG00000175356 | SCUBE2
Description
signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
Coordinates
chr11:9030758-9047562:-
Coord C1 exon
chr11:9047356-9047562
Coord A exon
chr11:9030926-9047355
Coord C2 exon
chr11:9030758-9030925
Length
16430 bp
Sequences
Splice sites
5' ss Seq
GTGGTGAGT
5' ss Score
8.95
3' ss Seq
AAGGCTATTGGTCCTTCCAGGTC
3' ss Score
6.29
Exon sequences
Seq C1 exon
CTTCTTGTGACCTGAGCTGCATCGTAAAGCGAACCGAGAAGCGGCTCCGTAAAGCCATCCGCACGCTCAGAAAGGCCGTCCACAGGGAGCAGTTTCACCTCCAGCTCTCAGGCATGAACCTCGACGTGGCTAAAAAGCCTCCCAGAACATCTGAACGCCAGGCAGAGTCCTGTGGAGTGGGCCAGGGTCATGCAGAAAACCAATGTG
Seq A exon
GTGAGTGGCCTGGGACATTCTTGCTAACAGAACAGCCTTGGGCTCCATAAACACTCAGGGTAACCGAAGGCAAGTCTGGCCCATCCTCCCTTCTCAGGGCTCACTTTAGAGAACACTCCGGGCAGTGCTTCTGTTTCAGTAACTGTTGCGTTTGTGTCTGTCGTCCCTGCTAGGCCCAGAGCTCCCCGGAGTGAGACTGACCTCATTCATCTCCCTGTCCTCAGCACCTGGCATAGTATCTGGCTTGTGGTGGGCACTAAAATGTTGGTTGACTTGAGGAACAGGAAAGAAGTGGCTGATGTTCTGATTCCAAAGCCTGTGCTCTGGTCCCAAGCAGGGTGAATTTCAGTAATTAGATTTCTCCAGGATAAACTGATGTCCTTTTCCTAAGTATCAGTAGAATCATGAGGCCCAAGCTTAGCTAAGGAGTAAGAATCCCATTTGTATTTCTAAGTAAGCAAAGCTGAATCCAGGGGCACTTGTTCCAGAGAATTGTCAGCCTTAGGCCCACAGCTCAAATTTGTTGCTTTGCCAAAACTTAGTGAAAATCAAGTGCAAAATCAAGTGTAACTGTCTACAAGAGGCTGGTTTCCAGATAGTCTTGATTTTCATTCCAGCTGATTCTCTTAAAAAGAAACAAAGTGGAAAAAAGTAAAAACAGCCCAGCTGGTTGATCTGTTCTCATTTAAAATTCTAAGAGTTCCAGTTTCCGTACTAAAATAGTGGGGAGAGTTGGCTGTGGCTGCCCTACTTTCCAGGATGAGTTGCAGAAACTGTCAGGGCCCTCCTGGCCTCTCAGGGTTACACTGCACCCCTCCCCCGTCTGCTATCCTGTTGGGGTTAGGCCTCACGGACGGGCCAGGGAGTCTTTGTGGCCAGTTAAAAAGTCAAGAAAACCTAATGTCAAGGGCCCCATGGACTGGCTCCCAGTGAGGGTATCACTAATACTACCATGGGTATGTTCCTGGGGAGTAAAGGCCCAAGGATAAGGAGCAGGAGTTACTTAACAGGGGCTTCATGACCACAACAGCCTACGAAAGACACTCGGGGCCAGGCATGATGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCAGCATGGTGAAACCCCGCCTCTACTAAAAAAATACAAAAAATTAGCTGGGCGTGGTGGCGCGTGCCTATACTCCCAGCTATTCGGGAGGCTGAGGCAGGAGAATCCCTTGAACCAGGGAGTTGGAGGCTGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGACACTCAGTAGAGGGTTTGTGTAGCTGTGGTGGTGTGTGAATGTGTCCCTGAGATGCTTGTCATGCTAAATTAGGTTTGATTTGTTTCTAGGGGAGCCAATGTGTCTTGTCTCAGGAGCTCCCAAACACTGGATGAATTCTGTAGCCCTCACAGCATCAAATCAGGTCCAGGTCTGACAGCAATGTTGAAGATTTTACCATGCAGAGAAAACGGCTCAAGCAGTTACCAGTGACATTCCCTCTTGCTGCTGAGGGAGGAAGTGGGTGTAAAGAAGTGTCAGGTGTGTTAATTAGAAAGGCTTTTTATCCAGAAGGCAGCATGTGGCATAGACAAGGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTCTTCTAGTCCTGGTCTATTTGATGGTGTTAGGACTTCATAAAGACCAGGCTTGCTGATGTTTTCTGAGCTCTGGATGGTACAGTGGAGACAAGCTTAGGATAGTTCCTTTTAGAAATGATTTTCGGTATTTGCAGAAAAGAGCTCAAAAAAAGAAAAATGGAGTCACTTCCATCTCTCCTGGGGGGAGAGATGGAACCATTATGTTTATCTTTTTAAATATTTTAAATTTAGTTTTCAATTATGAAAGTAGTGCCTGTTTCAAATGGCACAGAAATGTATACAGTAAAGATGAAAGTTCTCTCCACAGCTCCCTAATCCAACTCCCCAGCAGTAATCACTGTTATAGTTTGCTGTGTGATTTTTCCACAACTGTTTTTATGCACATATAAAAAGGAAATTTTATATAGTCATTCAATAAATATTTATTGAGCACCAATTGTGTGCCAGGTACCATTCTAGATATCAGGAATCCAGCAATAAAGAAACACGCAAACATCTCAGCCCTCACAGAGTTTACAATTTTAGAGGAAGAAGGTAGACAACCAACCAATAAACGAGGAAAGATACTACTATCATGTAGCAGAGGGCGACAGGGATATGGAGAGCAGGGCTGCAGGGAAGTGGAATGGAAAGTGCCAGGCCAAGGTGAGGGGTGAGGGATGAGGAGCGTACTCCCCCAAAGTGCAGACTGTGGTCAGGGAAGGCCTCATTACAAAGTGTCATTTGGGCAGAGACGCAAAGGACAGCAAGAAGCAAGCTATGGAGATATCTGGGGGAAGAGAGTTTCAGGCAAAGAGAACAACAAATAGGAAAACCCCAAGGTACTGGAAGGAAGGCCAGAAGGATGAGAGCTGAGAGAGGCAGGGAGGGAGAGCAAGGGCAGAGCAGTAGCAGAGGGAACTCGAAACCAGGGAGGACCCTGATCCCGAATCTGATGAGAAAGGAAGCCAGTGGAGGGCTTTGAGCATAGGAGTAACTGACATGTTTTCAAAAGATAACTTTGGCTACTGTGTTGAAAGTAGACTGTAGGTTTACGTATGAATAGATATATCTTTTTAAAAAAATAGGCTGGGTGCAGTGGCTCACATCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGAGGATCACTTCAGGCCAGGAGTTCAATACTAGTTTGGGCAACATAGTGACACTCTGTCTCACTATGTTGGTTGGTAGCACCTGTAGTCCCAGCTACTCGGGAGTCTAAGGCGGGAGGATCATCTGAGTCCAGGAGTTCGAGGCTGCAGTGAGCTATGATTGTGTCACTGCACTGCAGCCTGGGTGGCAGACCAAGAGCCTATCTTAACAAAATAAAAAACAAATATCAATACAATTTGAATAGTGCTATGTGTTGTTTTTAACTGTAGTTAGATCAAGAACATCTCTCTAACATGATAGCGGAGCAACCTCATTTCTTTTACAGCTTCCCAGGCTGTATTTGTTTGAAGACACCAGTATTGATTAGCCCTACCCCTACTGGTGAACATAGAAGTTATTGCTAATTTTTATATGGCAAATAGTGCTCAATGAATATCATTCTTTGTACACATGGCCAATATTTCTGAAGGATAGACTTGCAAAAGTACAATGGCCGACTCAAAGAACTTGCATATTTAAAACTTTAATAGATACTGCCAAATTACTTTCCCAAAAGATCATGCCTATGCATGTCGCTTCCAACGTTGGAAGCATCCTACATCTTTGCTAACATGGATTATTTATCATTGATCCTTTTCATTTTTGCAAATCTGGTAAGCAAAAAAAAAAAAAAATAGTCATTTTAACTTGGTTTTCTTTATTAGTAAGACTAAGCATGCTGTCTTATGCCTGTGGTCATTTGGATTCCTTCTTCTGAAAACATCTATATTCTTTGCCTATTTTTGCATTGAACTGTTTGTCCTTTGTATAGCATTAAAAAATAAATTTTAAAGTCCCAATTTACACCAGAGAAAATAATCACTTCTGACCAATTGTATATTTTCTTTCTTATCATTATTTTATATAGTAAAGTTTCATTAATTTGGCATTTGGGGACTTTGGGGACAGCCTGCTCTCCAAGTGACCTTTGTACCATCTGTGATCAATTTTAACAAGATGGCAAAAAAAAAAAATGATTATAGGGTCCAAGGAACAAATTTCTTAAGCTCTGTAGTACTTCATAAAGTTCTTCATGTCTAAAGAAAATTAACTATATGACATGGATGTCTAGCTATTGTACTTTCATAATACCAGCTAAAAGATAAATTATTTAAGAAATACACTGGATAATATATATGTGTGTGTATGCATGTGTGTGTATATATGTATGTATGTATGTATGTATTATATATACTGTATTTGGTTGTTTTGAAAACTTGCTGAGATTTTTAGAAGAAACAATCCAGACAACTGGCAAACTGGGAAGTATTTTAGTGCCTGGGTTCTTGAGAGACTAGGAACATTTAATTCCTTTTGTAACAGCTTACTGCTGTTCCTCTGCAGCAACCTTGGATATGTTGCTAAGGAGCCTCAACTTTATCTCTAGGTGACATGCTGCCATTGGAGGATTTACTCGGGAAGTGTCCAGGTCATATGTGTATTCTAGAAAGATCTCTCTGACTTTACTGGAGGGAGCAGAATTAGAGGCAGAAAGACCAATCTGGGGGCTTTTGAATGTGTTGCCTATGAGATACTGAGAACATGCAGGTCCTAGATAGAGAAACAGCAATGGGTTAGAGAAATATTTAAGAGGGAAAATGAGCAGCATTTGGGGATGACATGGATTGGGGACTGAGAAGGGGAAAGAGGTGGGCTGAGCTCAGAGGATTCTGATGTGGCCTGTGATCCTGGCACTTGCTTCCCATACATCCCTCATCTCACCATGCCCTGTTTCATATGCAGGAGGCACTGAGAAAACGCCAGGGGGTTGGTTGAATGATGAAATGAATGTGATCACTGGGGAAGAAATAATCAGAAGAGATTTATAGGAGAAGCAGGAAAAAAATAGGCTCTTGAGAGAGCATGAGAAAGGATGAAAAAGATACATAAAAGGAGGCTAAAGCCTGAATATTGAGTCAGAGAAACTGAGAGGAGTGCAGGAAGGCAAGGCAAGGAGGTTTTTGAGCCAGGGAGTGAAGCAATCAGAAAAAGAGTTTAGAAAGGTGCATCTGATGGTAGAATGGAAAGAGTGGAGGCAGGGAGGGACAGAAAGCCAGGGGAATCTTGGAAGGTTACTGCGGCAATCCAAATAAGAGACGGTGAGGATCTAAGGGACATTCATGCCATGGGGACGAAGAATAGGGGATAGAGAGAAGGGACACAGCTGTAGGATGCTGCCGCTGAGTGACAGGGCAGTGAGGAGAGAAGCCAGGGAGAGCTGTGATTTGGAGCCTTGGTGCCTGGGAAAATAGAGATGCTTCTGTAAGAGGAGTAAAGCCAGAGGCCAGGGAGAGAAGTGCTCCTTGGGCAACAAGATTTCTAGGCAGAGGTGTCCATGGGTGTCTGGGAGTCTAGCGAAACAACTTCTTCTCTTCATGTCCAGCCTAACTTGCCTAATCCCGAGTCTGTCCACACAGGCTCAGACCTGCCTCCTGTTAAAATGGATGGGCAGCCCATGCCTCTAAGGCCCCCCTCTATCTTGCACTCAAGCTGGAGCCTGTTCTCTCTCAGCTTCTTAAGAATGTTGCCCATGCTGTCCCCATCAACCCCTCCCATCTCAGAATTCTTCTCCTCTGCTAGATCATTTCCAACATCACACAAACCCATCTCCTGTCTTAAAAACCAAACAAACCCTCCATTGACTTCATGCATCTCTATAGCTACTGCCTCATTTCTGTGTCCCCCATTCTGTGTAGAACGAAGCTCTTTGAAGGAGCCGTAGTCATACTGTCTTTGCCTCCTTACCTCCCATTTCTCTTCAGTCTGATTTTCATGCCTAACCTCTCCACAGAAACATTTTCCAAGATTCCTAACCACCTCTGTGATGCCGAATCCAGTTGCCTTTCCTCACTCCTCATGAGGCATCCTCTCTGCTGATCACTCCCTCTCCTGGAAACACTTTCTTCCTGTGGGTTTCAGACACAACACACTTCTGCTTCTCCATACCTCACTGGCTGCTCCCTTTTCATTTTCAATGCTGGTTCCGGTTCCTCCCCTACTTTCTGATTATCCTAGGGTTGAATCCTTCGTCCCTTCCTCTGTCTTCACACTCTCCTTGGTGACCTTACCCAGTGCCATAGCTTTAAATACCACCACATGCTGGCGATTCTGAAACTGCCCTCTCCAGCTCCTTTGTCCCAGAGATGCTGAACATTTAAGAATGCACACACACACATTCTCTCTCCCTCTAAGTAAAATATATATGAATGTTTACTTATTTATAAACTATATACTTACACTATTGGCTAGTACACTATGTTCATCACAAAAGACAGAACAAGATAAAGATTAAACAAATTTAAAAATAACTGGCTAGCATCTTAAGGTAGAATCTTTACAATTGGGCGAAGTTCATTATTGATAGTGGTGGTTGCAAATCCATTTGTCCTATAGTCTTTTTGACTATTGCTAGTGCTTTAGGTGAACTCTTGACAGACCAGATTAAATCGTAACTGTTTCTGTCTCATGATGTAGTTTGACAAAGAGGTAATACACTAGTGCCTCCTTATAGGCAGTTTTGCTTTCTGTGGTTTCAGTTACCTGGGTCAACCATGGTCCAAGAATATCAAATGGAAAATTCCAGAAATAAACAATTTGTAAGTTTTAAATTGCCCACTCTTCAGAGTGGTGTGATGAAATCTCGTGTTGTCCTGCTCCATCCTGCCTGGGATATGAATCCTCCCTTTATGCTGCGTACCCACGGTGTATACCCTCCCCATCCTGCCTGGAATATGAATCCTCCCTTTCTCCTGCGTACCCACACTGTGTACCCTCCCCATCCTGCCTGGGATATGAATCCTCCCTTTCTCCTGCGTACCCACGGTGTATACCCTCCCCATCCTGCCTGGGATATGAATCCTCCCTTTCTCCTACGTACCCATGCTGTGTACCCTCCCCATCCTGCCTGGGATATGAATCCTCCCTTTCTCCTGCGTACCCACGCTGTGTACCCTCCCCATCCTGCCTGGGATATGAATCCTCCCTTTCTCCTGTGTACCCACGGTGTATACCCTCCCCCATGTTAGTCACATAGTAGTCATCTCAGTTATCAGATTGACAGATCACAAGAAGGGTGAGTACGGTACTATAAGATACTTTGAGAGAGAGACCACATTCACATAACTTTTTATTATAATATGTTGTGATAATTGTTTTATTTTATTATTATTGTTAATCTCTTGCTGTGCCTAATTTATAAATGAAACTTTATCATGAATAAGCACGCATAGGAAAACCCCTAGTGTATATAGGGTGTGGTACTCTCCGAGGTTCCAGGCACCCACTGGGGGTCTTGGATGGGAAACCTCCGCTCCACTGTGGACACGGGTGGCTGCTGTGCTAGGAGCAGAAGATGCACCCACGGGCCCTCTCCTGTGGTGCGGACGCGCGTGGCTGCTGTGCTAGGAGCAGAAGATGCGCCCACGGACACTCCTGTGGTGCGCATGGGCTCGCGTCACGTTTACGCCCTTCAGTCGGGTGTTCTTTCCGGGAATCCATCAAAGCTGCTTTCTATTTTGTGATGGTTAGTTTAGTTAAAAACACGATCATATAGGTCAGGACATCTCATTACCCAGGCATAGCTAAGCTGTAACTATTCTCTATGTATTGAGAGGCGAGAGTCAGTCAGTGCCCTGCGCCCGAGTTGTGGGTGCCAGTGCTTCTCTTTTCTTGGCGACCCTGGCTCCTCACATGTGTCTTGTGCCTCACAGAGATGGAGACTGGCTGGGAGGCTGCTCTTACACCATATTCTAAACCAGAGGAGCTTCGTTTGTTTCTTATTTTAGGTGAAAATTCGTAGGCATGGGTGTAGAAACGTGCTCCCACCCGGTGGATCATCTTGTCAACCCCCGAGGTGTAGTATTCCGCCTCAGAGACCAACAGTAGAACCCGTGCCTTCCTAGTGTCCGCACTTGGATGGCCAACTGGCATCTCAAACTCAGTGTTTCCAAACAAAGCTTCTTATCCTCTCAAGCTTCAAATCAAATCAAACCAGCATCTCAGTAAGGGGCACCTCGCCTCACCCAGTTGCTCAAGTGGAAAGCCTGAGTCATCTTGACCTCTCCCTTTCTGTTGCGTTCCTCATCCAGTCCGTGTGCAAATCCTGTCAGCTCTGCCTTCAGGTAATTTCCTTTATCTGACCAGTTTTCTCCTCCTCCGTTATTATTACTGCTCTGTTTCAAGCCACCGTCATCTCTAGCTCAGTCTGTTGTACCAGGCTCTGAATTGTTCTCCTCAGCCTTGCCTGGCCTCCATCTGTTCTCCACACAGCAGCCAGGACATCTCTTAAAAACATAAATCAGGCTGGGTACAGTGGCTCACTTTCGGATGCCGAGACAGAGGACCACTTGAGCCCAGGAGACCCTATTTCTACAAAAAGTTAAAACATTAGCTGGGCATGGTGGTGCAAGCCTGTAGTTCCAGCTACTCAGGAGTCTAAGGTGGGAGGATCACTTGAGCCCAGGAGGTTGAGTCTGCAGTGAGCCATGATCACTCCAGCCTGGGTAACAGAGCGCAACCCTGTCTCCTAAACGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAACATAAATCAGATTGTGTCACTGCCCCATTTCAAACCTCCAACATACTTTGGGTAAGGTCTAATTTCCTTACCATGGCCTTCAAGCACCCATGTGATCTGGCCCTTGCTTGCTTTTTAAAGTTCCTCTCTTATTGCCCTACCCCCTTATGCTGTGTTCCTACTACACTGCCTTTCTTGCTATTAGGCAATCTCATTGCAAGGCTATTTCCTGTTTTTTTTTGTTGTTGTTTTGTGTTTGTTTGTTTGTTTGTTTTTTAGACAGGGTCTTGCTCTGTCACCCAGGCTGGAGTGTAGTGGTGTGATTTTGGCTCATTGCAACCTCCGCCTCCTGGGCTCAAGCTATTCTCCCACTGGCATGCACTACCACGCTCAGCTAACTTTTTAAGGTGATTTTGGAAAGACGAGGTCTCACTATATTTCCCAAGCTGGTCTTGAACTCTGGGCTCAAGCAGTCCTCCTGCCTCAGCCTCCCAGTGTGCTGGGATTACAGGTGTGAGCCACAGCACCCAGCCTGTTTCCCACATTTTATTCTGGTCTCTGTTCAGAAAGGCCTTTCTTGGCCACAGTTCTAAAATAGCATATATACAAACTCCATCCCTACCCCCTCTTTGTAATCTTCCCCTGTTTTCCTTTTCTTCATCATACTACTACTTGCATTCTATTACATACTTATTTGCTTGCTCATTGAGATTTATTGCTCATTTATTTACTGCCCTGAGAACCCCATTAGAACAGGGTCATGTCTCTTCTCTGCTGTGTCTCCAGCTCCTAGAACGGTACTCAGCACATAATGAGTGCTCAATAAGTACTTATTGAATGAATGAGTAAATGAATCTTCACAGGGACAACAGATGAAATCCCAAGGATAGTAGATAACATTAAGAGAAAAGAGGGCAAAGGGCAAATCTTTGGAGAAATATTTAAATTGAGGGCAAAAAAGGCACTCTAAAGGAAGTGAAATTTCAGCTCCAGTTAACTAGGCATGAAAAGAACATAGTGTGCATTTGGGAACCCAATAAGGAAGAAGGCATCAAGCTGGGCTCATTTCTCTGCCTCAACTACAGGAATGTTTTTAAAGAGCAAACCTGAGCACAGGTCAAAAACCTGGACAATGAAAAATCAATCTCTCAGCCCAAGAAGGACTGTCCCCTGTTATCATGGGGGCAGTCATTTAAAGAGAGCTCAAACCAGGATCCTGAGGCCAACTCTGCCTGGGGCATCAGCACCTCTGGACTGGGACAAAGCAGCAGCCCTGGGGCACCCTGGGAATCCACGTGGGCTGCTTATGGCTCTTCTTCAGAAGTCAAGGCGTGATTCTTAAGAAAGCAGTCAAATACTAGAGGGTGACCCCTTTTATTAGGTTCATCATCTTAGCCACAGAGAGACCATAGTGTTTGTCTATAGCCTGAAATACTCAAAGGCCACAGTGCTGAAAAGAGGCGGAGGCTTCAAGCTTCTTTGTCGCCATTAATCCTCATCCTGCTGGTCTGTCCCTTTTGCATCAGAAAAGCTTTCTCGTATCTTTTTTAAAGAAGGAGAAAAAACAGCTGTGTGGGATTTGAGAATGAGATTTTAATGGTCACTGAAGGCACACAAAAGCTTTGCTGTGATAGTGAAGTGTTCTGGGGGCAATTGACTCCTTTGTCCTGGGCAGCAAAACAAGCTGGCTGCTGAAGGAGAAGAGAGAAGCCACTGGAACGTGTGATTGAGGTCTCTGCAGGCCAGATTCTCAGCACATTTGCAAAGAGCGGTTTTCAGGCATCCCTTCATGATATTTCAGAGTTGCCTTTTAGTGTTTAGCTCATTTTTACCTTGTGAAAGAATCAAATATATTTGGGAGGTGCTTGGCATGAATTATTTCTGCAGGTCTTTCTCTCTGGAAGGAAAATGGACACTGTGACTGACAATATGAGTTTGTTTATGTGAAGCAGGCCTTTCATTGTGAGGAAAAAGAACTGGTGCCCTCTTTTCCACAGGGCAGCCTGAAGGGTTTCTTGGCACTTCGAGCAGTTAAGAAATGGCACAGAGGTGGGATATTGTGAGGTCTCTCTAAAGGTCACCTTGCAAAGGCTGTGGAGGTTGAAAGAGTTCTCAGCAGCAGGGACAGCAGAGCAGCAGGAGCCCATCCTGGTCCCTGGCTCAGTGAGAACCAGGCCTGGTGTTGTCCACCTGCTGAGGACATCTGTTTTCTGCCAGAGGAACCATGATGGAACAGACCATGGTGATGTGACTCTACGTTATGATTAATGGGGCTGTTGGAATCATTGTCACCATATCGGCACTTTCCCTTCCGTGGATGAGTATTGTAAAAACAGCTCTTCTTCAGATAGAAATGGCTGAGCAGAGGGGCTCTGGACAGCCTTGGTTTTACCTGCTTCATGACAGGTGAGCTCCTTAGAGCCATGAAGGAGTTATTCTCTGATATACTGGCCTGCTACAGACACTGAAAGAGTCAAGTGGGACACAGGGTAAAACGTGAGTTCGTAATACAGAATTCAGCCCAGCTTTACATGAGAGATGGGCTGGAACCAGAGCGATATGGAAACCATTATCCAGTAGGGCTGCATTTAGAGAAGAAGTCTGGAATTATACTCTATTTGCCATCAGTCTCATTATAATATTGTTTGCCAATAAAACAAGAGTTTGGTTCACTTTTAATTTTTTAAAAATATAAAATTGTAGTCGGCCATGGTGGCTCATGCCTATAATCCCAGCAGTTTGAGAGGCTGAGGCAGGTGGATCACCTGAAGTCAGGAGTTCGAGACCAGCCAGGCTGGCATGGTGAAACCCTGTTTCTATTAAAAATACAAAAAATTAGCCCGGCATGGTGGTGCTTGCCTGTAATCCCAGCTACTTGGGAAGCTGGGGTGGGAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCGATGAGCTGAGATCGCGCCATTGCACTCCAGCTTGGGCAACAAGAGTGAAAACTCCATCTCAAAAAATCTATATATATAAAATTGTATTTAAATGATACATGAATGTTGTAAAAGAAAATCCAAGAAATATGAGTATTAAGATTTAGATATTTGGATAGACTTTATTAATTGGTTACATTGAATTGTAGAAATAATATTTAAAATGTGGCATATTTTTTGCTTACCATGATCCAAAAGCCTGATTTTTTTTTTAAGATTTTGGAATGAATAATGAAAAGACATTTTTATTTCTTATAACAGAGAACGTTCCCATGTTTAACCCTAAGAATATATATGCAAATTGCATTTGTAGAATAGGATGAAAACCGATCTCCCTTGTTACAGACACTGGAGAGCTGTAATAGTTAACTTTATCATGTAATTTTTTTCTATTTCTTGGCAGCTTACATATAGAGAATGTTTGTTCCAGTCAAACTCTCCTAGCCCCATAGAGAATCCTTGATAAAGTCTTCAACTGCACTTAAATCTGCCCGTTTGTTAAATAACTTTTTTCCCTTTTAAACTCAAAGCTCTTGATCTTACAGTACCATAGGAGTATTTCACAAATTAGCTGTGGGACTTTGGCCAAATTATTAACCTCTCTAAGTCTCTGTTTCTGTAAAAGGGTGCTAATAATAGTACCTAGATCCTTAGGGCTGTGTTGAGGAATAAATGAAATACTATATGTAGAGCTTTTGACATGGTGTCTGGTATAAGTACTCAACAAATGTTAGTCATTAGAAATGCGATGACTCTGATGATGTTTGAATAGTAGGGAGCCAAATTTGGTATGTTTGCTTCATATTCATAGCCTAACATAAGGTACAAATCTACATTTAACAGTACTAGAAATAGAACCAGAAGCAACATTGATGAATTTCCTTATTTACCAGCATTTACACTTTGTTGTATTGATTTTTTTTTTCTTTGAGACAGAGCCTCACTCTGTGGCCCAGGCTGGAGTGCAGTGGCACCATCTCGGCCCATTGCAACCTCCGCGTTTGCAGAGCTCAAGCAATTCTCCTGCCTTGCCTCCCAAGTAGCTGGGATTACAGGTGTGCACCACCACACCCAGCTAATTTTTCTGTTTTGTTTGTTTGTTTTTTCAGTAGAGACGGGGTTTCTCCATGTTGGCCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTTGGCCTTCTAAAGTGCTGGGATCATAGGTGTGAGCCACTGCGCACAGCCTGTTGTATTGTTTATTATGAACCTGAAGTGTGCTATTTTGTAAGGGTCTTGAGATCACCACCCATCCCAGCCGGCCACCAGAGAATGAACTTTTCAAAACACAGCTTCTGGACATCTTCCTCTTCTTTTCTTTCTTCTTTTTTAGAGAAGGGGTCTCATTTTCACTATGTTGCCAAGGCTAGACTCAAATTCTTAGGCTCAGGTGATTCCATCTTAGCCTCCCCAGTAGCTAGGACTACAGACGCACACCACCATGCCTGACTCCTGTCCTTTCAATGATTCCTTTACCTGTGACAATAAAATCCAAATGCCTGGCACTCAAGAACTTTTGCAGTCTATTCCCAATCTTTTCTTTCCTCTCCTCCTGATTTAATGCATGAACTTTTAGAACCTGCCCCCTTTCCCAACTGCGAAGATCCTATTCATCCTTCAAGGCCTGACACAAATGTGACCTCCTCTAGGACACCTTTCGGGATGCCACCAGACAGAATTAATAACACTCTGTTCTTCCAGCACTAGACCTATGTTCAATGAATGATTTTAACCTCTATAATTGTGTCAACAGCCCTGTGAAGTAGGGAGATCCAGGATTTTTAAAAATCTCTCTTCAACCATCAAGTGCTTGTGCTACAAAAATAATTCGAACCCCTGTGATCCCTATTCTCAAGGAGCTCATGGTCTAGGGAGAGACAGAGCTGTAAACACCTCTAACGGGGCAATGAGGATCAAGCTGTGCAGAGGTGTGCAGAGAGAACCAAGGCAGGGCACACTGCGTATTCAGGGAGTTTGCATGCCGTGGGTGGTGTGGTCAGTGCCATCTATTTGCCTTCATCTCTAGAACTCACATCATCCTTCCTTGGCCTTTGTGTCCACACTGACCAGGTTGTTTCCCTTTTGGCTAGTCAGTTGCAGGGCTGGGACCTATTATGATGGAGCACGAGAACGCTGCATTTTATGTCCAAATGGAACCTTCCAAAATGAGGAAGGACAAATGACTTGTGAACCATGCCCAAGACCAGGAAATTCTGGGGCCCTGAAGACCCCAGAAGCTTGGAATATGTCTGAATGTGGAGGTAAGGATGCTGTCTGTTCCTTCCTACTCCTCCCATCTCTGATGTCATTGTTTAGACAGAAGGCATCTCAAGGACTCCAGACAATGCACACTCACCCGGGGCTTCCTACAAGCAGGGACCACGTTGGCTCGATTCATCTTTGGCTCACCAGTGCCTAGGTCAGTGCCTGACACATGCTGGGCAGATACTCATTTGAGCAAATAAATGAAGATGGGGTAGAATACACTAGCAGAAGAGCGTAAGTGTTGAAACTGCGTGCTTTCTTCACTGGAAATATATACACCTGAAACCTGAGTGATTTCCCTATCTATAGGTACTGTTTTGAAAGTGTTAAAATGAAGAGAGGAGGTCTGGGTTTTTCTCCAGCTTTGGTCTCAAATTCTTAGCTTTTTTATTTAAAACAAATATATCCGTTTATTTTGTTAAAACTGGGACCTCCTCTGTGAAGAGCTTTTCATTATCTCTTATAAAATGTTAACTTTGAAGTCAATCTCAAGCTCTGTGGGCTTTCCTATTTATTTTATTATTAAATGTCTTCCTTTTATTAAATGGGAGAAGGGCTGGCTGTATTGACACTCTGTGGGCTCCAATGGCAGGTGTGATCTGAATGGTGATTTATATCTGATGGCCACGGCAGAGTGAAGACCCCTCGTGCTGCTCCCACGGCTGTCCTTGGAGTGACTCCCAGCCTCAGCTTTATTTCCCACCTAAATAACTCCAAACTGAACTGCAAGGCTGTTTCTGGCTTAAAAATCAAATCCTCATATTGACTGTGTGACTCCTATCATCTCTTTGGTCTGTTATAAAACTCCAAAACTAACTGCAAGGTTGATGAGGGGTGACATTTTGGCATGAATTTACCCTTGTATGTGACATTATTATTATATTTTCTTGAGACAGAGTCTCACTCTGTCACCAAGGCTGGAGTGCTGTGGTGCAATCTCGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCATGCCTCAGCCTCCAGAGAAGCTGGGATTACAGGTGCGTGCCACCATGCCCTGCTAAATTTTGTATTTTAGCAGAGATGGGGTTTCGCTATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTGCCTCGGCCTCCCAAAGTGTTGGTATTACAGGCGTGAGCCACTGCACCCGGCCTATGTGACCTTATTAAGAAAAATTTAGGCCAGGCATGGTGGCTCATACCTGTAACCCTAGCACTTTGGGTTCAGGATCACTTGAGCTCAGGTGGCTAACCCTAACCCTAAGACCAGCCTGGGCAACATAGTGAGACCTCGTTTGTAGAAAAAAATTAAAAAAAACAAAAAATAGCTGAGCGTGGTGGCACATGGTAATCTCAGCTACTTAGGTGGCTGAGGTGCAGGGACAGCTTAAGCCCAGGAGGTCAAGCTGTAGTAAGCTGTGATTGTGCCACTGCACTCCAGCCTAGGCAACAGAGACCCTGTCTCAAAAAAAAAAAAATGACAGCAATAAGAATATTAGTAATAATGGTTATTATAGCTACCATGTATTGAATATTTACCTATGCCAGGCATTATGCTAAGTATATTATATGAATTATTCACAATTCATATAATCATTACAACTCCACGAGGCTACAGTGACTCTTTTAAGGTCACACAGCCAAGTGGAGGATGTGGAATCAGAACCCAGGTCTGACAGGCTCCAGGCTCCTCCCAATGGTGTGTGTTCTTGAAATGCCATCATATCTATAACTTATGGGGGAAAATGAGACCACTATGATTAATAGAGGAGAGATGATTAAGAATATAAGAGATAGATAGCAGATTTTGATAGCATCTTGCCAATGACTAATTCCTGAGGAACATGTGCTTTTAGAAATCCTTTTGTTTGTTTATGACTGTGTTTCTTGTCCCAGGTATAACATGTGTAAGATCTAACTTAGTAAATATTATTGTTAAAACAGGGGAGACTCTTTGGGTCACTCTTTTTTTTTTTTAGAGACAAGGTCTTTCTGGATCACCCAGGCTGGAGTGCCGTGGTGCAAATATGGCTCACTGCAGCCTGGAATTCCTGGGCTCAAGTGATCCTCCTGCCTCAGTCCCAGAGTAGCTGGGACTACAGACATGTGCCACTATGTCTGGCTAATTTTTAAATTTTTTTGTAGAGATTTCGCCATGTTGCCTAGGCTGGTCTTGAGCTCCTAGGCTCAAGTGATTCTCCTGCCTCAGCCTCCCAGAGTGTTGAGATTACAGGCGTGAGCCATCAAGCCCAGCCCGGATCACTCTTTATATCAATAGGCTGTAATCAGCTGGGTAAAGGGGTACTTCTGGGTCTAATTACCAAATTGGTCCCAGGGCAGAGAACTCTCTCTCCTGCATTGCAGGGGATGCCTAGGCAGTGTGTAGGCCTAAGCCTGAGAACTACCCAGGCCTTCCCATACTTTGGAAGCAGTTGACACTTGACTTCTTGGTTTCCATCTTTGCACTGTGCTGTGTAGCCCTGTGTGTAAACAGCAGGCACTCATGTGCCATTGACTCAGGGTCAGAAGCACCACAGCATTGACTGTGTGCTCTCTGACTGAGGTGGGAACTGCGGTCAGCACTGGGTAACAGGTTGGACTGAAGTTGGTCTCATTTGGAGAGTGGGGAGCAAGGGTCTGCCTGGAGGCCTTGCTCACGTAAGGCTATTGGTCCTTCCAG
Seq C2 exon
GTCTGTGTCAACCTGGTGAATATTCTGCAGATGGCTTTGCACCTTGCCAGCTCTGTGCCCTGGGCACGTTCCAGCCTGAAGCTGGTCGAACTTCCTGCTTCCCCTGTGGAGGAGGCCTTGCCACCAAACATCAGGGAGCTACTTCCTTTCAGGACTGTGAAACCAGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000175356:ENST00000520467:16
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.303 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF076998=GCC2_GCC3=WD(100=84.2)
Main Inclusion Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains