Special

ENSMUSG00000007279 @ mm10

Biotype
protein_coding
Gene Symbol
Scube2
Description
signal peptide, CUB domain, EGF-like 2 [Source:MGI Symbol;Acc:MGI:1928765]
Coordinates
chr7:109798676-109865679:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
95.18
24.57
0
Alternative 3'ss
70
chr7:109838197-109838266
-
4.82
24.57
0
Alternative 5'ss
27
chr7:109806043-109806069
-
89.64
31.12
0
Alternative 5'ss
102
chr7:109805968-109806069
-
10.31
31.12
0
Exon Skipping
168
chr7:109809078-109809245
-
95.04
100
0
Exon Skipping
171
chr7:109810585-109810755
-
19.06
51.83
0
Exon Skipping
205
chr7:109807911-109808115
-
3.88
24.49
0
Exon Skipping
84
chr7:109830797-109830880
-
99.49
7.86
1
Intron Retention
15519
chr7:109809246-109824764
-
8.86
36.17
0
Intron Retention
607
chr7:109843270-109843876
-
7.99
33.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000175356 SCUBE2 1-to-1
Human hg19 ENSG00000175356 SCUBE2 1-to-1
Rat rn6 ENSRNOG00000013123 Scube2 1-to-1
Cow bosTau6 ENSBTAG00000020573 SCUBE2 1-to-1
Chicken galGal4 ENSGALG00000005892 SCUBE2 1-to-1
Chicken galGal3 ENSGALG00000005892 SCUBE2 1-to-1
Zebrafish danRer10 ENSDARG00000037362 scube2 1-to-1
Fruitfly dm6 FBgn0052373 CG32373 8-to-1