MmuEX1003803 @ mm10
Exon Skipping
Gene
ENSMUSG00000032826 | Ank2
Description
ankyrin 2, brain [Source:MGI Symbol;Acc:MGI:88025]
Coordinates
chr3:126950735-126953299:-
Coord C1 exon
chr3:126953177-126953299
Coord A exon
chr3:126952489-126952521
Coord C2 exon
chr3:126950735-126950756
Length
33 bp
Sequences
Splice sites
3' ss Seq
CTATCTTGCACGGCATCAAGGAA
3' ss Score
0.72
5' ss Seq
GAGGTAATT
5' ss Score
8.88
Exon sequences
Seq C1 exon
GTTCGTGACACAACCCAGGAACCTTGCGGGCGACTCTCATTTATGAAGGAACCCAAATCCACAAGAGGACTGGTGCATCAAGCTATTTGCAACTTAAACATCACCCTGCCAATTTATGCCAAG
Seq A exon
GAATCGGAGTCAGATCAAGAGCCGGAGGAAGAG
Seq C2 exon
ATCGGTATGACATCCGAAAAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000032826-'95-106,'95-104,97-106
Average complexity
S
Mappability confidence:
90%=80=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.121 A=0.964 C2=0.963
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
ENSMUST00000182064fB5781
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types