RnoEX6011477 @ rn6
Exon Skipping
Gene
ENSRNOG00000011076 | Ank2
Description
ankyrin 2 [Source:RGD Symbol;Acc:620156]
Coordinates
chr2:231253928-231257620:-
Coord C1 exon
chr2:231257498-231257620
Coord A exon
chr2:231255705-231255737
Coord C2 exon
chr2:231253928-231253949
Length
33 bp
Sequences
Splice sites
3' ss Seq
CGACATCTTGGGGCATCAAGGAA
3' ss Score
-0.95
5' ss Seq
GAGGTAATT
5' ss Score
8.88
Exon sequences
Seq C1 exon
GTACGTGACACAACCCAGGAACCTTGCGGGCGACTCTCATTTATGAAGGAACCCAAATCCACAAGAGGACTGGTGCATCAAGCTATTTGCAACTTAAACATCACCCTGCCAATTTATGCCAAG
Seq A exon
GAATCGGAGTCCGATCAAGAGCAGGAGGAAGAG
Seq C2 exon
ATCTGTATGACATCAGAAAAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000011076-'80-71,'80-70,82-71=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (No Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.098 A=0.711 C2=0.989
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Conservation
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]