MmuEX6042870 @ mm9

Exon Skipping

Gene

ENSMUSG00000022024 | Sugt1

Description

SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915205]

Coordinates

chr14:80019516-80029562:+

Coord C1 exon

chr14:80019516-80019606

Coord A exon

chr14:80024648-80024829

Coord C2 exon

chr14:80028659-80029562

Length

182 bp

Sequences

Splice sites

3' ss Seq

TCTGTCTTTTCACTTTGCAGATG

3' ss Score

12.56

5' ss Seq

TTTGTAAGA

5' ss Score

3.14

Exon sequences

Seq C1 exon

ATTGAAATTAAAATGAAAAAGCCAGAGGCGGTGAGATGGGAAAAGCTAGAGGGACAAGGAGATGAGCCCACACCGAAACAGTTCACAGCAG

Seq A exon

ATGTAAAGAACATGTATCCGTCCTCATCTCACTATACCCGGAACTGGGATAAGTTGGTTGGCGAAATCAAAGAAGAAGAAAAGAACGAGAAGCTGGAGGGCGACGCAGCTTTAAACAAGTTATTCCAGCAGATCTACTCAGACGGTTCCGATGAAGTGAAACGTGCCATGAACAAGTCATTT

Seq C2 exon

ATGGAGTCTGGTGGTACAGTCTTGAGTACCAACTGGTCTGATGTAGGTAAAAGGAAAGTTGAAATCAACCCTCCCGATGATATGGAATGGAAACAGTACTAAATAAATCAATTTGCTATCACTGTATTGCGTGTGTTCGAGAGAGCCCATTGTGTGCTTTATCATATTCTTGAGTTTTAAACAGTATCTTTTGAAAGATTAAACCTTCTTGCCTCTCTGTGCTTTAGAAATGATTTTTCCTGCAAGTATTCTAAAGAGTGACAATCACATCTTATCATTTCTGTCCTTAAGGATTTTGCACATCCTGAAACTGAATGAAATGCCAGTTGTTCCTAGATAGATCCGCTCTGTCTAGTTATGAAGTGGAGAAATCTTTAATAGCATCTTGGGTAATTGCCTTATTTTTGATGCAGTGTTCTGTCAATAATTGATTAGACCTGGCAACTTTGGTGGGTCTAACGTTTTCAGCTTCAGTGTTGTGTTTACTTTTCAGAGCTGCT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000022024-'14-17,'14-16,17-17=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features