MmuEX7034396 @ mm10
Exon Skipping
Gene
ENSMUSG00000033196 | Myh2
Description
myosin, heavy polypeptide 2, skeletal muscle, adult [Source:MGI Symbol;Acc:MGI:1339710]
Coordinates
chr11:67176537-67177451:+
Coord C1 exon
chr11:67176537-67176629
Coord A exon
chr11:67177171-67177234
Coord C2 exon
chr11:67177353-67177451
Length
64 bp
Sequences
Splice sites
3' ss Seq
ATATTAGTTTTCCTTTCAAGGGT
3' ss Score
7.43
5' ss Seq
CCTGTGAGT
5' ss Score
7.21
Exon sequences
Seq C1 exon
GGGACGCTGGAGGACCAAATCATCAGTGCCAACCCCCTGCTGGAGGCCTTTGGGAACGCCAAGACCGTGAGGAATGACAACTCGTCTCGCTTT
Seq A exon
GGTAAATTCATCAGGATCCACTTTGGCACTACGGGGAAACTGGCATCTGCTGACATCGAGACCT
Seq C2 exon
ATCTGCTAGAGAAGTCCCGGGTCACTTTCCAGCTTAAGGCGGAAAGAAGCTACCATATATTTTATCAGATCACATCCAACAAGAAGCCAGAGCTGATCG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000033196-'1-18,'1-7,9-18=AN
Average complexity
A_S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.032 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0006316=Myosin_head=FE(4.4=100)
A:
PF0006316=Myosin_head=FE(3.1=100)
C2:
PF0006316=Myosin_head=FE(4.8=100)

Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
ACGCTGGAGGACCAAATCATC
R:
CCGCCTTAAGCTGGAAAGTGA
Band lengths:
132-196
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types