MmuINT0086130 @ mm10
Intron Retention
Gene
ENSMUSG00000029475 | Kdm2b
Description
lysine (K)-specific demethylase 2B [Source:MGI Symbol;Acc:MGI:1354737]
Coordinates
chr5:122921385-122932951:-
Coord C1 exon
chr5:122932467-122932951
Coord A exon
chr5:122921472-122932466
Coord C2 exon
chr5:122921385-122921471
Length
10995 bp
Sequences
Splice sites
5' ss Seq
AAGGTGGGC
5' ss Score
7.93
3' ss Seq
GATCCTTTGTTTGGCCACAGAAT
3' ss Score
8.05
Exon sequences
Seq C1 exon
ATGCCCCAAGAAAAACCAGTGTAGACGGCTTTTCATCCGACTCCTGGCTGGACATGGAGGAGGAGTCCTGCGAGCAGCAGCCACAGGAGGAAGAGGAGGAGGAGGAGGACAAGGAGGAGGAAGGAGATGGTGCAGATAAAACACCCAAGCCACCCACCGATGACCCCACCTCACCCACCAGCACCCCGCCCGAAGACCAGGACAGCACAGGGAAGAAGCCTAAAGCCCCTGCCATACGGTTCCTCAAGAGGACGTTGTCCAATGAGTCAGAGGAAAGTGTCAAGTCGACCTCGATGCCCACGGACGATCCCAAGACGCCCACGGGCTCCCCGGCCACCGAGGTTTCTACCAAGTGGACTCACCTTACCGAATTTGAACTGAAGGGCTTGAAAGCCCTGGTTGAAAAGCTAGAGTCCCTTCCGGAGAATAAGAAGTGTGTCCCTGAGGGAATCGAGGACCCCCAGGCCCTCCTGGAAGGTGTAAAG
Seq A exon
GTGGGCAGGGGCCATGGCTGGGTCGGGCGTAGGGGTAGATACTCTGGGCTGGTTCTTCGTCTAGGAAAGCTTATCTGGATTGTGGAGTCTGGGACCACTTAGCTAGGTGGAGGCTTGCCCTAAGGTGACACCAATTTCTTTGATGATCCTTTTAGGATCTCAAGGCTCCCCCTCCAATCCCAGGAGGTTTAGCGTGTGTTGTAACAATGTTCTGTTGGGTTTGGCAGACAGACTTCTCTGTCTCTTGGTGTGAAGGAGTCCCGTTCTGGGTTGATTTCCTCGGGCACGAGTTTGTACTCGTGAGCCGGTCACACTTCCCGGTGACCAAACTTAGAGTCGTCGACTATGGCAACCTAAGGTTGAGCGGTCGCCATGATCTCAACTGTATCTGCATTCTCTAATTAGAAATCAAGCCCTGAGGGCCAGGTAGAGCTGGGATACGAATCCAGGAGGGGTGCTACAGAGCTGGCTGGGCACCCCACTGTGCAGAACTGCTTCTTGTAGCTTAGCGAAGTCTTGAGGCCTCTCAGTTTGCAGCCCTGGGGTCTGATTAGGGCAGTACAGCTTGCAGTCTGCTGGTGTTAGAAAACCGAACTTAAGTTTCTTCCTTGGGAATTGGTAGTTGAGCTAGGCAGCATTGTGGTGGCCTTGCAAGGGCTCGGGGAATCGGGCAAGGTTGTGGGTTGTTGGGAGTATGTGAAAGTATTGGAGTTTGGGTCAAGTAGCCTAACAGTTATGGTATAGGGAACCATTGGACAAAACTCACTAGTCCAGGAGTACTTAACTTACTAATTTGATTTTGTTGTGTGTGAAACCAGATGAACACAGGGTATCACACACACTGCAGGTCCTCCTCCATCTTCCCCACGTCCCATTTCTACTGGGTATTTTTGTAGTTGAAACCTGAGGATTCTGTCCTGTGGCTACTCCCCCCCCCCCCACCCCCCCACTCCCCCAGACAGGGTTTCTCTGTGAAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCCAACTCAGAAATCCACCTGCCTCAGCCTCCCAAGTGCTGGGATTTAAGGTGTGCGTCCACCACTGCCGAGAGCCTGTAAAGTGAAATTTTTAGTCAATTCGTTTCTAAATGTTTGTTTTGGAACAAAACTCTCCAAAGTTCTGAGTTTCTTGGAACTCAGAGATCCACCTGCTCCTGCCTCCACCTCTAGGTTAAACGTGCGGAATGTTCTTCACTTTAAGAGCCTCCGTGTGCCATGTGCATTGTGTTTCCAGGGAGCACCCCTGGCTCCAGGCCAGGTTTCTGTCTAGGTAGAAGAGCGAACTCCTTTCCTCTTCTTGTATCCATTGCCCTCTGAGGCTGGATTCGCCTGCTGGTGAGAAAGCCTGTTGAATCACAGTAATAGGTAGAAAGCAGAATCCTGTACCTCTATGTTGAGGCTCATACCATGCCCTGAGACCTGTACTGCTGTGGTTACCTGGCTGAGTTTTCTATTTAGATTTTACCTTATTCACTGGGATGGTAAAAAAGAGATCAGAGTCCATAGAGAGCTGCAGAAATGGAATACTGGGTGTCTACAGAGGCACCAGTATTTACTTTCGTTTTTGAGACATCCCCTCCTCTCTCCTGGGCTAGGATAGCTCCTGAGTGATTTTGTAGACCAGGATGACCTCCAAACTTGCCGTCCTTCTGCTTCTACTTCCTGAGCATGGAAATGCAGGCGTGTGGCACTGTGTTCAGTTCATGTAGTGCCGGGTAACTGAACCTGGGCACTCTGCATATTGTGAAGGAATGCTGCTAGCTGAGGGGACACGCCCCTCTTGAAATACACTTATTTTGATAGCAGGACCGGGAAATCAAGGTCCCTGAGTTCAGATTTGACTTAGGTTCTCAACTGCTTGCCATGTGGCACTGGGCAGGCCATCCTGCTTATTATTTTCTGGGGCTTTGTAAAATGAAGTTTTACAAATGAAATGAAATTTCGCAACACTGGGGAGGCAGAGGCAGGTGAATCTCTAGGAGTTCAAGGCCAGCCAAGGCTGCATAGTGAGATGCTGTCTCAAGAAGCCCAAAACGAAACAGATATTGGACGTGGTGGGCTTCATTCTTCTAGGGACCAGATCCTTCTGAAGGAAATACTCTGAAGTACGTGGGTATTTCATTAGGAAGTGGTGTGGTGGGGCTTGCTTAAGAGCTCTTCAGGCTTTTTATAAAGGACCAGAGTTGAGTTCCAGGCCACCAACCTTAGGAGACTCACAACCATCTGTAAATGCAGCTCCAGAGGACAGTGCCCTCTCCTGCTTCCCCCCCCCCCCCCCAGAGCTCCTTGACTTACATGCATTAGCAACATGCAGACACAAACGGACATTCGATTAAAAATAAAGTCTTCGGATGGTGGTGGCACACCCCTTTAATCCCAGCACTCTGGAGGCAGAGGCAGGCAGGATCTCTGAATTTGAGACCAGCCTGGTCTAAAGAATGAGTTCTAGGGCAGGCAGCAAGGGCTACACAGAGGGACTCTGTCTCAGTAAAATAAAATAAAATAAGATGAAATAAAACAAGACCTTGGTTAGGTAAATAGCTCAGGAAATAGAGGCATTTGTGTGAAGTCTGATGACCTGAATCCAATCCCCGAACACACGTGGTAGAGGAAGAGAATGGAGTTGGGTGATTGACCTATCCTCTGACCTTTATAGGTGAACCCTGGGATGACCCCCAAGAAATACACATAATAAATTTTTTTTTAAAGATTTATTTATTGATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCCATAATAAATTTTTTAACCAAATGTTTTTTTAAAAAACTGAGAACAGGGGTTTGCTCTCATAGAAAACTACATGGTATCTGTAATCTTCTAGAAAGTAACAATCTGCCGGGCGTGGTGGCCCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAACAAACAAACAAACAAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAACCAACCAACCAACCAACCAACCTCTCAGGTTTCTGTGTACACATGAGCCATATAAACTCATAAAGACACACATACATAAAAAACATAAAATGAGTAAGTAAGCAAATCTTTCAAAAAAGAGAGAAAAAAAAAACTGAAATGGGGTCTGGCAAGATGGCTCAGCGGGTAAAGGTGCCTGCCACCAAGGCTCACAACCTGAGTTCAGTCCCTGGAACTCACGTAGTAGAAGCAAAATAAATAGATATAATAACAACTATTACTTTTTTCTTTTTTGGTCTGTTTGTTTGTTTGTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGCCTGGAACTCACTCTGTAGACAAGGTTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCTCCCCGAGTGCTGGGATTAAAGGCGTGTGCCACCACTGCCTGGCTGGACCCTTTTTAAAAAGGAAGAGCTAAGCACAAGGACGGCAGGGAACTTATTTTTGAGGAACAGTGACATTGGTTTGGGCCAGCCTCTCTGGTCCCGGGATCTTACCCGCCTCTCTCTCTCCAGCTCTCATCTGTTCTTTAGGGAGTGGTTACCATCTGCATTAGTTTCCTAGGACTGCAGTCTCAGAGCACCGTGTGTTCAGTTGTTTTCTGGGACTAAGAGACTGCTGAGTCTGAAAGCAAGAAGATGTTTACAGAGCCATTCCTATGCCTAAGGCTCTAGGAAGTGCCTGCCCTTGGCTCCTCCCTCTTCTTGTGGCAGCTTGCAGTCCTTGTTATATCCCTCCCACCTGAAGCCATGGTTAAGACAGATCATAATGGTGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCTCCCCACACCCCATCCACCCATATTGTCCATGAGTGACACCAGCCATTAAATTCAGGCCCAGATGAATTCAGCGGAAACTCAGGTCAAATTGATTAAATGTATTGAAACTGTCCCCATAGTCACAGCCTGGGGCTCTCACTGCACATGAATTTTGGGGACACACTGATTAGCAACAATCATGGGACGAAGTAAATAATTGTAAGATGGGATTGGCTAGCAAGGCGTCTCTCCTAGAAACATCCCTGCTCTCAGCTAGAACTCGGAGAGAGTGGTGGCTCTGGGTAGAGGGGATAGAGGGGTGTGTAAGTATTTGAGGATGACTGTAGTCCTCGGATCAGTTCTAAGGGACTAGAGTATAGCCAGGTATGTGGCAGGGCTGTGGAGGGCTTTAGCACATGGGCAGGGATGACCGAGAGTGTAGGTGGATGAAGCAAGGTGCTTCCATGATTGGGCAAAGTGCAGCCCAACCATCATTAACTACTCTATGCCCCGCCCTCTTGGCCTGAGTCCATGCTCTTCTGGCTAGCCTCACCTTATCATGGTATAGAAAACCATCATATCCGTGTGCATGGAATTGTGGGGCTGCAATCGAATTGTGGGGCCAGTGGGAATTATAGGGGCTACACAGCTGTAGGGCTGAAAGACACATTTCTTGTTTTAAAAAGGCTTTCTCTCCCTTTCCTTCCTACCTCTTTCCCTCCCAGCTCCCTCCCTCTTTCCTTCCCTCCCTTTCCATCTTTATTCCACCCACTCCTACCCCCCACCCTCCACCCCTGCCCCCACCCTTCACCTCTACTCCCTCACTCTTTGGATACAGTCTCGCTCTCTAGCCCAGGCTATATAGAGCTCGATCTGGTCCTAATCCTGTGGCAGTATTGTCTCAGCCTCTCCAGTGTCAGGATTATCGTCACGAACTAACGTGCTGGGCCAAGTGTTTCTTTCTCAGCAGCCTAGAGATCAGTTGTTGTATTCTGGCATCACACTCCAAGCATGAGAGAGAAGAAAGTCCTAAATTCGGAGTGGGCTGTGGATGTCAGTTCTAAATTAGGAGTCCACTGTCCAAACAGATGTCGCTTGGCTTTAAGGACAGTTGTGGAGTCAGGTCACACAGTCCCTGCACAGTCCATTATGTAGCTGACGTTCTTGGGGACATGGTAAAAATAGGAGAAGGTGTGATCCATTGTCACGGCTGACACATGTAAAGCCCAGCAGGGGCCTGAAGTTCTCCGTAAGCTAGGGCTGATATTATTTCAGACACTTTGGGGTGAAGACAGTTTTGTTACCGGTCTGGTCTGAGAGCTAGAGGAGCCATGTTGTAAGGAATGGGTAGAGCCTTTTGTTGCTGTTTTTTGAGACAGGGATTCTCTGTGTATCCCTGGCTGTCTTGGAACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCCTCTGCCGCCCAAGTGCTGGGATTAAAGGCATGCGCCACCATTGCCCGACCGGGCAGAGCCTTTTTTCTTTTGAGGACTTAGCATTCTCCACCCTGGCACCCACCTGCTTCTAAAGATCCTCGTTTCTGGTGTTACCAGTTTTCAAGACAGCGAGAGATGTACAATCTAGATTTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTTAGAGTTTGGCCCAGGATCTTGGGAATGTTGCGTGTGCTGGGTCACAGAGTCTCCTCCTCCAGCTCTGTTGACTCTGTAAAACCTTCTTGCCTACTTCAAAGGAGGCTTCTCCTCAGAGGGGAGCTATAAGGCAGGAAGTAAGTGCCCAGGGGGGCTGGCTGGCTTCCAGTGTGATCACAGAATCTTGTCCCCTGCCTATGCAACCTCAGGAGCCTGGGGGAAGGACTCTGCATCAGGTATCCAGGTAGCATCCTAATCCAGGATCTAGGATTCACCTTACTGTGTAGAGACCTCTTACCCACATAAGATTAGAAGTTTCCGTTTGCGTGTATTGGAAGTTAGAGTTAAGACTTAAACACAGTTTTATGGGGAGGACTGTAATGCAGTCTACTACAGATGAAGTGGTTGTTTTGTTTGTTTTTCCAGGTGCAGATAGGAATAGAGGGAGGGGTTCTGAGACCCGAATAAACTGTCACCTGGTGCTCCCCAGAACAGCAGTTCTGGCCTTGTTACAGCCCCCTCATGAACCCCACTGTTGGAGCTCCAATCCTAATGCCAGGCATTGCCTTCTTAGTGCTGGTATTTTTAGTCATGGCATAGGCTAGGGGCTTCCAGTGATTAACACCCCACTCTGGGGAGCAATGGAGGCCAAAGCTCTTGTTAACAAATTAAATTCTTGGAGAGAAGTTGGCATGATGGGGGGAGGCAAGGTTCCTTTGGTAGGTCATACATGGGGCAGTTTCCAGCAGCAAGAGCCAGGTGAGGGCAGGAAGCTTGCTCTGGGATTGGCGAGAGCCATGGGCTTACAGGGTGTGGTCCTTAGGGGGCTGGGACACCGAGGACACACAGCCTTCATTCTGTTTGTGTGCTCCACGGTCCCTGAGAATGTGTCAATTCAGGCAGAGCCTAAGGAATCCTGTGACATCATTCCCTCCGGAACATTTTTTTCTGAGACAAAAATCTTGCACTAGGCTACGAGCCTCCCCTAAATTTCGCCTTTACAAATGAAAATACACCCCAGGAAGACAGGCGCCATTGTGCCCCCTAGTGGCCATCAAATGCTGTACACAGAAGGGAACTTGGCATTGTTTAGTACAGGAGATTTGGGATACAAGGGCACCTTGGGAAAAATTTAAAGCTAATGTGTTTAATTAAAAAATAAAAAGGAGCTGGGTGTGGTGGCGCATGTCTTTAATTCCACCGCTTGAGAGGCAGAGGCAAGTGGATCTCTGTGAGTTTGAGATCAGCCTGGTCTACAGAGTTCCAAGACAGCCAGAAACTTTGTTTTGAAAAACCAAAAAGGAAATAATAATAATAATCAGAAGCAAGTAGATTTCTGAGTTCAAGGGCAGCCAGATATACATAGCCATGTCCTTAAATAAGAAAGCAGTTTTATTAATACCTTATTTTTTTTTAGATTTTCTTCTTTTTGGGGGGGGGGCTAGAAACCCTTTAGAGATAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTATAGACCAGGCTGGCCTTGAACTCGGAAATCTGCCTGCCTCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGGACTACCGCTTCCTGGCCTCCTTTCTTTCTTTTTTTAATGCATGGTTATTTATTTGTGGAGGGAGGATCTCACTAAGTCTGGCTAAAACTCATTCTGTAGATCAGGCTGACCTTGAACTTGTCCAGAGCTCATTTTGTCTACCTCCCAAATGCTGGGATTAAAGGCATTTACCCATTCACCCAGCAAGAAAAATTTTAGGTTTATGGAAAATTCAGAAAAATAAAACAGCTCAAGTATGTTAACATCTTAGTATAATACATTTGGCACAATTATTAAAACTAATATTTTGTTATTTCTTCAGATTTCTGCAATATTTACCTTTTGTTGCCCAGAATTTTGTCCCTGATTCAACATTTAATTTCCTCCTCAGGGTTTTTTTGTTTTTTCTTGGTTAGCCAGTGTTTCAGACTGCCCCTGTTTTGAGGGGTTTGTCAGTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTATGGTTTTTGGTGGTTTGGGGGAGCTCTGGTCAGGTATCTTGTTAGCCTGTCCTTTAGGGGACCGAAGCTTTATGTCTTGAGTTTTACCTGCTGGAAGCTTTCTTTAGTCATTGTTATACATAGTTATTGGGTTAGACAATATTGGGTATACAACAGTGTGTCAGTCGTTCTTCTTATGCTTGGTCAAAATATCTGTCAGAAGCAACATCAGTCAGAGAGACAAATGTCCTGGCTTGCAGCATCAGAGGCTCATTGATAGCGGCAGGGGAGGCATGGTGACAGAAGCCACCAGCTCAGCTTGCTGTGCCTTGGCAGCAGACAGGACTGAGAAGAGAGCTCAGGCCAGGAAGCCTCCAGCCTCACTCTTACTGCCCTATCTCTGCCCTGTAGGCCTCAGAGTCCAAGAAGGGAAGGGTTCTGTCATCTCTCCAAACTGCCACTAACTGGGGACAAAGTGTTGACGTGCACGAGCTTGCAGGAGACCTTGTTCATTTAAATCATAACATAGTCGACAAAGATATTTTATAACTAGCCGTTGTGGGTCAGTGATGCTGGGTGTTCCAGGGCAAAGATTCGAACCCGGGCCACCCCGGTGACCTCTGTGCTGTTGGCTGCCTCCCATGGGGAGCTGGAAGACTGAGGCTTGCTGTATCAGAAAATCAGTCAATCAGACGGTGACCAAGCAAACAGGATAGTCCATAGAGTCAGTTAGAAGTGGATTGGATTCCTGTCTGCTAATACAAATGAGAGAAAATGTCTTGAAAATAAACGCCAGGATCATCTCAAGATGGCTCATGAGGGAAAGAAAGGCCTGACAGCCTGAGTTGTGAAGGTGGGGAGAGAGAACTGACTCTACAGAGTCCTCTGAACCGCATAAGCACGCTGTGACGTCACCTCATACAAGCATGCGCGCCCCTGTTCCAATGAATGTGTATACGCGCACACACAAACACGAAATACTTTTTTTTTTTTTTTAAGTGTAAAATAACCATTACCTGTGTTTATCTTCTGAGTGCCTCTGCTATCCCCATTAAATGTCCTTCTATGATTGGCAGTGTTCTTAAATGCCGCCAAAAGAATGCCTTTAGCTGGCCATCTAGTTTCGATGTTGACAGAAAGAAATCAGTTGTGCCGGGTGTATTGGGTTTAGATGCCAGGGTACCACAGGGTGTTTGTTGCTTTGTGAGCAGTTTGCAGGTTCCTAAAGGGTGATCTGAACTCTTACCAGATTCTGGCTTTTTGGCATGGTGACTTTAGAACCTCATTCCTGTGTAAGAAGCTCTCCACTGAATCGTCTCTCCTTTACATTTGGGGGCACCATGGCTTAGAAAAGTGTAAAAGCTGGGGATGATACCCCTGGGTAAGGAAGAACTCTGCCCTGGAGACCAGACTTTACACCCAAGAACTTCTCCACGTAGGGAACCAAGACGGGACAGAAACCTGTGTTTAAGGGCTCAGACTTGTCAACCAACCCCGCTGAACTTTGTCCAAGCGCTGTATGAAAGCCTTTTTTCCTTTTTCCCTCCCCCATTCTCTGTCTTTTAGTCTTTTTTGTTTTGTTTAGTGGTAGGGTCTCCTGTAGCCAAGGCCGGTCTCAGACTCACAGTGTAGCAGAGAATAACCTTTAACTCCCCAGCCCAATGCGTGTACCACCCCATGCCTGGTTGGTTGGTTTTTTGTTTTTTGTTTTTAAATGATTTATTTATTTCATGTATATGAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACATCCATCCGATTCCATTACATATGGTTGTGAGCCACCCTGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGTAGTCAGTGCTCTTAACCTGAGCCATCTCTCCAGCTCCCTGGTTGGTTTTTTTATTTGTTTCTTTGAGAACATCATTGCACTTAGGGACTTCAGAGATTCTAAGCTGCTCATCTACCTGCTTTGCAGGTTACTTGGTTAAAAGTGAAACAAGGGTGGTTCTGCAGGTAAGAATGTTTGTGGGCCAGGTGGTGGTTGTTTTTGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATTTATTTATTTATTTATTTATTTATTTCGAGACAGGGTTTCCCTTTGTAGCCCTGGCTGTCCTGGAACTCGCTCTGTAGACCAGGCTGCACATGATGAACTCAAATTTATCTGCCTGCCTCTCAATTACTGAGAATATTTAGGCGTGCGTTAGAACCACCACCTGAGCCAGGCATGGTGGCGCATGCCTTTAATCCCAGTACTCAGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGGGTTCCAGGATAGTCAGGGCTACACAGAGAAACTCTGTCTCGACAAAACCAAAATAAAATAAAATAATAGTTGCTTTCCAAGCATGAAATCCTTGCACCCCATTGTAAAGCTGGCCTTGGTTCTACGCATGCCTGTAATCCCAACACTCCAGTGGGCGGGGACGGGAGGTGCTCTTGGGCTCGCCTAGCCTCAAAACCACAAGCTGTGTGTTTTTCATTTAGAGATTCTGTCCCAAAGGACTGAGGTGGAGAGAGAGAGTGGAGGTTACCCAGTGCCCTCCTCTGACTTCCGAGTTCTCTGAGGACAGGATACGTGAGCATACGCTACAGATAGAAAGTGTGTGTGTGAGAGAGAGAGAGAGTCTGTGATACTCCGGACAAGTGTTTGGTGTCACTTTGGGTACAAGATGGTACGTGCCTGGTAAATTCAGGGCAATGTGCTACATGCCTGGATCTCTGTAGGTTCTAGGCAAGCCAGAGCTAAAAAATGAAATCGGGTCTCAAAACATTTTTGGGAAGCGGGATGGATGTTGTATGTTGTAATGTTGTAAGTCCATAGGAATTCTAGGTGACATAGTTGGGCGGGGGTTGTTTTTGTCCCCCCGCCCCGCTTTTTGCGATAGGGTTTCTCTGGGTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGACTGGCCTGGGAGTCAGAAATCAGCCAGCCTCTGCCTCCCAAGTGCCGGGATTAAAGGTGTGCACCACCAACTGCCCGGCTGAGCTTGCAATTCTTCAAGGGTTTAGTTTGGCCTCCTTTAGGGATCTTTCCTTCACCCTCAGTTAATATGGATCCTTTGTTTGGCCACAG
Seq C2 exon
AATGTACTGAAAGAGCACGTGGATGACGACCCCACCCTGGCCATCACCGGGGTCCCTGTGGTCAGCTGGCCAAAGAAAACTGCAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000029475:ENSMUST00000046073:11
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.859 A=NA C2=0.276
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types