MmuINT0113674 @ mm10
Intron Retention
Gene
ENSMUSG00000029822 | Osbpl3
Description
oxysterol binding protein-like 3 [Source:MGI Symbol;Acc:MGI:1918970]
Coordinates
chr6:50352985-50370358:-
Coord C1 exon
chr6:50370123-50370358
Coord A exon
chr6:50353102-50370122
Coord C2 exon
chr6:50352985-50353101
Length
17021 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGG
5' ss Score
11.08
3' ss Seq
TGTTTCTTCCACTGGGACAGGAC
3' ss Score
6.33
Exon sequences
Seq C1 exon
AGATTTCCTCTGAGACTTCCAGAATGGCTTCTAAACACATTGGGTAAGAGCTGGCACCTGCCTGCGAGGACTTCATACTCTCAGCTCCACCATCTTCCCATGGCATTTTGACTGCGCTGAGCCCAAAGGACCAGCTCTTCACAATGAGTGACGAGAAGAATCTCGGTGTGTCTCAAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTTGCTCCTCCAAGCAAGGAAGCCGGCAG
Seq A exon
GTAAGGTTTGACTGCTGTGGCTCTTATTTGTAGGTACAGATGTGTGTTCACTGGGAGATGCCACCTTTCAGTTTAAGAGCAAGCCCTTGTCTTCATACCTGGTTACGTGAGGAGAATCAGTTCAGGTTCCTCCCAGGGGCCGAGAATGCATTTGGCTCTTTGTGTTGTTTTGCTCAGCCCTTGCAACTGTTTACCAACATAGACACTAACATTCCCATTTTCCCTCCAAGGAAACTCAGTCATGCAGGCCAGATTACGTGCCCCAGTGAGGACCAGATGCCAAATAAGAGCTCCATCTCTTCTGCTCTAGAGCCCACCTTTTTCTTTTTAAAGATTTTTTTAAAATTTCTATTTTCTGTTTATGGGTGTTTTGCCTGCACGAATGTCTGTGCAACACATGTGTGTAGTGCTCTCGGAAGATAACAGGTGACATCAGTTCCCCTGGAATTATCATAGCTGGATATCAAATTCCATTCCACGATGCCGGGAACTCGAACTGAGGTCCTCCGCAAGAGTGATAAATGTTCTTAACTTTGGAGGCATCTCTCCAGCCCCTCCCACTTTTCCTTATACCCTGTTAACCAAAATAGCAGTTATCACTTTCCCAGTAATTACATTACTACCTCCTTCCATTCACCAGTATTTTGATGAAAGCCTGTACCTCCAGATTGTCTGTGAGTGGCTAAAGTCTCACTTGCTAGTTTTTCCCTAATGGGATGAGGGGAGCCAGTAAACCTGGGAAAGTGATGAAGAAAACAGTAAAACAGAGGAGAGAATCCTAAAGCCCCAAGTGACTGTCTGTGGTCACTGGTTGCCACTTGGTTTCCTTTCCAATATGGCGTTGTTGACAGATCTGCTGGCGTCCATCGGTAACCATAAGGGTGTATTAATCACTGGAATCCATCCTTGCTTCACCAAGGCGATGGATGGGAGGTATGCAAGAAAGCTGGATTTCCAACCTGAGAGGCCTTTGAACTGTTCAGTATTTACTGGCTCTGTGGGCATTGCTTTTGCCCTATGAGAAGTCTGGCCAAAGACTTTGCTTTTTGTCCAGGGCTGGAAGCAATAATTAAGCAGTGGCCTACTTCGGGAACACTGAATAATAGTGACTCAGCTAAGCATATCTTAGTTTGAACATTTGTCTCAGTCAGGGGGCTAGCTACTCACCCACAAGTCCATGCTTTTGGGCAAATTAAAGTTTGCTGTGAGCTTAGAGTGTAGGGAGCCCTTTAAGATCTGTTTGGTTTTTGTTTTTTGTCTTTTCTTCTCATTTGTCTTTGTGTGTATGTGTGCATGTGTCCATGCCTGTGAATATGGCTGCACCTGTGCCGTGATGTACGTGTAGAGACTGGAAGACAATCTCAGCTATGGATCTTCACCTTCCACCTTGAGACAGTCTCTTCCTTGTTTTCTGCTGCTTACACCAGTCTGGCTGGCCCAGGGACTCTCTTATCTCTGCCTCTCATCTAGTAAGAATGTTGACATTTCAGATGCTTGGCCTGTGACCTCTCTGCAATGAACTGAGATTGTCATGTTTGTGTGGTGTGTTGGCTAGTGTTTGTTGTTTTGTTTTGTCTTCTGTTATCAGGCTGACACAAACTCCCGTCATCTGAAAAGGTGGGACCTCAGTTGAGAAGTTGTCTCCATGACATTGCCCTGTGAGCAAGTCTATAGGGGGAATTTTCTTGATTAGTGCTCGTTGTAGGAGAGACCAGCCCACTGCAGGCAGTGCTACCCCTAGGCTCTACCACCCTTTAGTTGAATAAGAAAGCAAACCAAGTCCACTGTAGGGAGCAAGTCCGTAAGCAGCATTCCTCCATAGTTTCTGTTTGAGTTCCTGCCTCCAGGTTCCTGCCTTGGCTTCCCTCAGTGATGGACTATAACTAGGTTGTGAAAGCCAAATAAACTCTTTCGTTTCCAAGTTGCTTTGGTTTGGTCTTTCTTATAACAAAGAAAGCAAACTAGAACATGGGATAAGCACTTTTACTCACTGACCTAACTACCCTGCCTCTGGGTTTGTTTTTGTTTTTAAGTTTGTCACTGCCTAATGCTAACACCATGGGTCCCTAGAGATCTGCTCTCATGGGAGTGAGTGTGCCTGCCCACTTGGGCAGCTGCCACCAGGCTTTCGGCTTCCTACTTCTTCAGCCAGCACTCAGGTTTGGACCGGAGCAGAGTATGTCATTTGCCCCCCTCCCCACCCTCACACCCCAACTCCATCAACTTGCGACAAGCAGCACCTCTTCTTCTGCCCACGTTTGCTTCACAGGGAGGCTGAGCTCAGTGAAGTAGCAAGTCCTCCCGGAGGAGCCATGTCTTCCATCCTCAGGGCTGTGGTAACTCTTCCAGTGCGTTCATTGATGTTGGTTGATTTGGTTTTCACAATGCAACTTTCACTCTGAGTTTCCATAAAAATACCAAGAGGAACTCACACCACCCAGTGCTTCAATTTTTCTTTTTTGACATTTATCAAATGGTAGTCTTTTCTATTTAAGACCGTCCACTTTAATTTGCATAACCAGTGTGCGCGCGCGCGCACACACACACACACACACACACACACACACACACACACACACAGTTGCTTTATGTGCTGGTCAGGTTTCTGTCAGCAGAAACACCACAAACAATCACCTGGGAGAAAGGAACTTCCATACAGAACTGCCGCTATCAGATTCACCTGTAGGCATGTCTGGGGGACATTTATTGATTGTTGGTTGATGAGGAGGGGCCGGCCCACTGTGGGCAGTGCCACCCCTACACGGGTGGTCCTGGATGGTGTAAGAAAGAAAGCTGATCAAGCTATGGGGAGCAAACCAGTCAACGGTATTCTTCAGGTTTCTGTTTATGGTTCCTCTCTGGACTTCCTTCTGTAACGAGGGCATATAAAACCGGTAAACCATTTCTTTCCCAAGTTGCTTTTGGTGCTGATCACAGCAAAGAAAGCAAACTAGAATACTGTATTAGTGTAAATAAATGTTTGTATTTCCTCTGTGGCACTGGACGGGGCTCTGCTGGCATTTCAGGGGCCATGGAGGCTCTCCTTTGCTGGCACTCAGGAGCTGTAGAAGCTCTCCTTTGCTGTCCTTTTGGGGGCTCAGCCACTTCCACTGCATCTGTCAGCTGCTAAATAAAGCAAAGCAGCACTTTGCCAGCCTCGTCACAGGATGCTCAGAATGGCAAGGTTTCCACAGCCACAGGCTGCACTGCAGACATGGTAAAACAGCAACTGTCAATGACACGTGCAGCCACCTCCTGGCTTTGGAGGTGCCACTGTGAGACCCCTTTTTGGTCTGTTTTCCTTTTATCTGGAGTGGGTTTGTCCCATGTGCACGTCACTGACTGTTATCTGTGGTGCTAGTTTTCCTTGCGTGCTCTGGACTGTGGTCAGAGCCTCATCTTGCATGTCTCCTGTGAGATCTCTAGTCACTTGTCTTGGTTTGGGATAGGCCTTCTGCTCCCAGGGACTCTGATCCAGGGCAAGTCTCACATTGCATTGGGGACTCCTTTTCCATGGTGAGAATGGAATGTCCCAGATCCTCATCAGACCAGCAGATAACCTGGCCCAGGTTTAGCCGCCCTCTTCCACTGCCCCGATGAGCAGATGGCAAAGCCTCCGTTCACTGTACTGTGGGCAGTGCACCATCCCAGTTTGTGGCAGTGAGCCTGGCTCAGGTGGAGGCCGTTTTAGCTCCCACAGGTCACAGAAGTAAGCCAACGATCACGTTTGCCCACGGTGTGTTTACTTTCTTTCAGATCCATGAAGACTTTCAGACTTTTACAAACATAATCTTTTTCCCCTTTAGCTTTATTGAGGTGTGACTGACAAATGAAAATTATACATATTTATAGTGTATACTATGCTGTTTTGATATTTGCATATGGTGTAAATGATAAACAGAGTCCAGATAACTAAAGTACCGATTATCCTAAATAGTCATAGCAGGTGTGTGGCTAGCAGGAACATTTAAGATTTGATCTCCTGGACTCGGATGTTCAGTCTCTAGACTGTTCAAGGACCTGGGCTCAACCCCCAGAAGCTACATAAAGCTGGCTGTGGTGACAGACACTTGTGAACCCAGTGCTGGGAAGGGTAGAGACAGACAGATTTCTAGGGTTCACTGGCCGGCCTAGCCTAATGGTTGAGCTCTAAGCTGATGAGAGACCCTGTCTCAAAAATAAGGTCCCAGCTCCTGAAGTATAGTATCCAAGGTTGTTGGGAACGAAAAAGGGGGCCCTGAGGAAGAGGGGGGAGGAAAAACCCACACCCCGCCAGAGTTTTACCTATTCTCTGGTCTGTCAGGTGTGGAAGAGCTGCCATACACTTTCCACTCAGCCCTGGGTGGGCACTTAAGCCTCTGACCCATTCTTCAGGGGGTGGCCAAGGGGCAGTCCTACCTGGGATCCCCGGAGCTACTTTGCTAAAGCCACCAGGGTTATAGGAGAGAGGGATGAGGAAAGAGAGGTTCCCAACACCGGCCAGAGTGAGGGCACGGATCTTGACTGGAGCACAGGAAGGCCTTCTAAAGGGAGATAAGAAACGGCTCATTAGGAGAAAGCCTGTTCCATCCTCCAAGCGCAGTGGGCCTTGATGAGCAGAGACATTCTATGGTTTTAGAGCTTTATTATAGAAATGCAGAGAAAAGGGGAGAAGGTAGAAGAGAGAGAGGGAGGGAGAGAGAGAGAGAGGAGAAAAGCTAGAGAGTAAGAGGGAGAGAGGAGAGGAGAAGACAAAGAGAAAGAAAAGAGGAGAGAGAAGTGAGAGGTAAGAGAACAAAGGAGTGAGAGGGAGACAAGTAAGAGAGCAAGCAGGGGCTGAACAGCCCTTTTTATGGTCTTTACTGTTGCTTGGTAATTGGGGAGGAGTTTAGCCTGAAGGTCAGAAGCTTGGGCCATTGCCTACGTGATTACTGACCATGCTTCTCTTGTGGGGACTGTGGGGGGCGGTAACTTAGGCAGGAGCCAGAGTTCCAGGAGCATAAAGGAGCATAAGCCTACTGTGTCATGTAGGTGACTTATAACTTCAGGGTTCAGACCTCAACTCAACTGGAGATCAGCCTGTCTGTGCATAGCCCAATGCCCCACACAAGGTTGTCCTCTGGCCTCACCTGCACACATGGGAACATTGCCCTCTGGCCTCACCTGCACACATAGGTACATGCGCACACATGGAGACTTACTGTCCCTACAAGTGTCACAACTAGTTTTCCTGTGGTATTCACAAAAGTATCCGTTCCAGGAGCCCCACTGATAACAGAGTTCAAGAATGCACAGGCCCTTTGTGTGAAATGTGAGACCACCGCCCTGTGTTCTTCTAGTGGTCTAGATTCCTGATAGAAATAGTGTGTTATCAGCCGCTATGCTAGATTCAGGGCCTGGTGATGAGAGGAAATGTCTCTACATGCTTGGGCACTCTTTCTCTTGGAATACTCTCAGGGTGTGGTTAGCCGACTCCGCAGATGGCAGAGGCCACAGGTGGCCAGTGCAGTATTCTCACCCGCTGACCCCATGTCACACCTTAGATCTTCAGAATTGCTTCCCTCTGAGGAGCTGGAACTTTGAGCTTCGGATCTATGCCCTCGTGTCCTCTAATCTACAAGTGTGCCGTGCCTTCTGCTTCTGTGGGTTCATGTCCTCACGCGGCTTGTGAACTTGAGACAGTGCACAGTGTGCTTTCCTGTGCTTTGTATCATGCCCTCCAGTTTCCCCATGTCTCAGATGTAAAGATGGCATCCTTTTAAAAGGCAGAATTGTATTTCTTTCTGAAGAAAAGATATTATGTATGTCTATATGAGAAACAGTGGCATGTGTGTGCTAAATGTATATGCATACTACATTTTCTTTTCAGACTTCTTTTTTTACTCCATGAATATAAGACAGCCTAGAAGTGCATAGCTTTACACATTGTTATTATGCTTGGAGTCTGCGTAGCACCAGGAAGAAGACACTAAGAGCTTGAATTTAAATTCCATAGATACCACACACACACACACACACACACACACACACACACACATACACACACACACACACACACACACACACACAGAGCACATTTTGCACAGATCACACATACTGTACTCATCACACACAAACATACCACACTCACATACATCATACATGTGATATTTTAAAATAAGAATAATGCCCTCTTGCTCATGGGACTCAGTCTCTCTAAAAACCTTTCTCTTAGGTTCTCATCCGGCACAGACAGCTGGTGATCCGAGTCTCTGTACCTTGGACTTTCTGTTTGTTAAACTTCTTTGCTTGTCTTTGATACTTGTATTGACTTGAACCTACCTTTCCTATATACATGTGTGTAATGTCTGGGACTCATGCACTTCCTTGTAGATCCCCCCTCCCCTGCATGTATCTCTCACTTCTGTGTAGATTTCCCCGTGCATGTATTATGCAGTTCTATGTAGATACTCCCCTGTTCATGTATCAGCGTTAAAGGAACTTATTTCTTGAAGGAGAAAGTGAGAACTAAGTGAGATAGTACAGAACGTGCCTGGGCTGGCACGTGAGGGATGCTCAGAGCATGAGGATGAAGTTAATGAGTGACTAGGCATGCGGTTGCTAGGTAGGAAGATACCTAGCAGACTGTTCCCTGCCTTCATGAGGTAGGTGAAGGGGCATATAAGTAGGAGAGAGATTTGCTATTTTTAAACTTATAAAATAGGAGTAATTATAATTTCCCTTTGTCTTTTCCCCCTGCCCCCTTCTGTTCCTGCCTAGAAATGTCAAAGTATTGCATTTTAGAAGGGAGATGGGGCTACGCAAATGAATGGGTGTGGCTTGTAGTAGAGCCCAGTAGCTAAGGTGTATTTTGGTTTTGGTTGGCTTTGGGTTTTGTATTTTTTTTCAACTACTTCTATTGAGAGGCTACTCCTGGACGTGCTTGAGCAGGAGATGTAAAACTGTGGAGGACAGAGGAGCCAGAGGGAGCGTCACAGATAAGAAACCAGCTGATGCAAAGCTCCTGGCTGGAGCGAGGCCACAGCTCCCAGGCTTTAATGAGATGTTAGCATTTGGCATGAAAACCGAGAGATGAGACAGTAAGTTCTGCTAACCCAGTTCTGAAGCATGCTCCCACCTCAGCCTGGGGCTTGAAAGGGAGAGATGTGTTCCTGAGTGAGTCTCCCCATGGTGACTCAGCTTGCTCCTGTCCCCCACTGTCCCTGGGCTAATCTTTGGTGGCATTTGAGCATCCTCCAGGTCACCCAATGAGAGTTAATTTATGCAGCCATTCACTGATGCTTCACTTCAGAAACCACAACAAGTCTGGTACAGTGCCAGAATCTATAGAACAGCTAGGTTGACTGGGAGAGAATTTACCAAGCTTTGCATGAGGAAGTAAAGGTTGAGGTGTTGACATTTTCATTTGAGTATTGATCATGCTAAGATCCAAGCCAGGTGTCGTAGCGCATGCCTATAATCACACTACTTGAGAGACTGAGGGAGGAGGATAGCACGTTTGATACAAGCCTGGGCCCAAGACTGTCAAGGAGAGGGAAGAAGAGGAGGTGAAGGCAGTCATATTGATTTATTTAATATAGTGGCACTGAGTTAGATGAGGTTCCTTATTAAAGCGTGGAGTAGCCACAGTGCAGGTCATGGGAAGAACTCGGGTGCTCCAGGGAGAGTACGTCTTCCCCGCTATGCAACGCTTGGCTCACTCCCGAGATGCTTGAGCTGCAGCCTTGAGCTGAGCCGGCTCTTTGGCTCCTGCTCATGGAAGAGAAAATCTACTCCAGTGATTTGATGATTCCAAAATGCTAATGGCAGTCAAGATAGCTCAGCCACTAAAAGCGGTTGCCACACAGGGCTGACAGCCTGTGCTGAATCCCAGGGACCCAAACAAACAAACAGCCTGGGTGTGATGGTAAGCATCTGTAATCCCTGTGCTCCTATCAGGAAACGGAGGCAGAGAGGAGAGAATCACCCTTGAACGCTAACGAGTGTAGAGTATGAAGTGCGGTAGAAATGAGAGAGACCTCGCTTCAACACGGTAGAGAGCATTTACCCCTGAAAGTTGTCCTCAGGCCTCCACACGCACCGTGTGGCATGCATATGCTCACACACACATCCCACACACATAGGCACACAAGAATAAATAAAAGCAAAACAAGTCTAATGGCCCAGAAGTGACAGCGTGGGATGTAGGACAAGGCTGAACAGAAGGCACCTAGACATTGGTATTAGTGGAGCAATGAACATTGCCTGCCTTCCAGAGGACACGCAGAATAATCTGGTTTGCCCCTGGATGCTGGCCTTGGCATGAGGCTAGCCATATTCCCCTCTGTACCTTTCACAGGGGTAGCTGAGTCAAGTGTCCTGGCACGTCTCTGACCTCGCTCTCTCCTTTACCTTGTGCAGTTTGGTTGATTACTGGTCTCCTAAAAGAGAGGTGCATAATTCCCCCTCACAACCTGTGAATGCACACTGTTTGGAAAGGAGGGCCTGAGTAGATGAGGTTAATTTAAGGACCTTGAAAAGGACAGGGCATCCTTAGTTGTGTGAAGGGCCCTAAATTAATCAGCAAGAAGTCTGCCCAGGAGAAACACAGGGAGGACATGATATGAAGGTGGAAGTGGGCATGGTCATAGCAACAAGCTGAGGGGTAGCGGAGAAGCTGCAGCCTCCAGAGACCAGGATAGCCCAAACTGTCTCCCCTCCAACCTCCAGAGAGAGCCTGACTCTGCCTACACCAGGTTTGGGATTTCTGGCTTCCAGCAGTGTTGAAGAATTTTAAACTTCAGCGATGGGTGGTCATAGAATAGGTCTATGATCCCAGCACACAGGAGGCTGAGAGAGGAAGAGCCTACATTTGAGGCCAGCCCGGGCTAAATATAGCAAGACCTCATCTCAAAATCAAAACCAGAGAGAGATTTATTGGTTGAAACTTAAAGCCACTAAGTTGGTGGTCGTTTGCCATGACAGCCTCAGAAAATTAATTCTCTCTGCTTAGAGTCCAGCTCAAGCTCTTAGTCCAAAGGCATGACACCTTGGAACAGTGCCTGTCTGAGCCCCAGCTACAGTGTGTGACGTCCTCATGTGGCACCTACAGAGTTCCAACCTGTGATGCCTTTGCATTTCTCATGCGTGTCATTGCTTGGTGGTGTGTCTCAGCTTTTCTTGGGGGAGGGGTGCACTTAGTGTGAGGACTTTGTGTATGGGAGGGTTTGCCATTTTAAATGCCTGTGACCTACGCCTGTGATTCTAAGTCACGTGTGCAGCATTTCCCAGAAGGTACTTCTGTTTTGGTTACAAACTTCCATTAGCTTTCTGAGCACCCTGAGATGGAGACCAGAGAGCATGGGTGTCTAGCGTAGACGTGGGTCTCTCGAGAGATACCAAGCACTGTCACTGAGTGCCACTGTGGCTTCTCTGGGTAGAGTCTGCATTTTTTTTTCTTGCCAGTGCTCAGATACCACAGGGCACTGTATGCCACACACACGCAAAAAAAATTTTTTTAAATCAAAAGGTAATAAAGATAAATAAAAAAAGAATGTTGCAAGATAGAAGGAACAAAAATGTCATACCTTCTTACTGTTGGCCCCCAATCCATTCACATGGGCTGTTCAGGGGAGTTCCCACCTGACCTGGTGAGTTAGCCCAGTCCTGGTCCCCCAAAGCCTCTCAATTTTGTGACCCCACCAGGTAATTGATGTCACTTAAATTCTTTGGCAGAAGAACTCAACAGGTGACCATCATATCCTCCTTCAAATATGAATTTCAAAACAGACATTTCATGGCTCTGGGGGAAAGTCCTTGAGGGCAGAATAGGTTCAGTGTCCCTGGGTAGGGAAATCCATGTCTGTCTGGGTGTGTGTGGTGGGGCAGGGCCGGGAGGTGGGACAGGGGCTGAAGGAACTCCACTGAGTCCTACTGCACCTGTGGATGTTCTTGTCCAGACAATATGTCCAACAGCAAGATTCCGTGTGTGAGCTGCAGAGCCCACAGATATGTCCTGTTGCTTAGCAGTTATGTCTTGGGCAAGCTACTTTGGACTTTGGTGATGGTCCCCTCTGTGTGATGAGGACACACAGGACACTTCACTCCCTTCATTACTGTCAGGACCGCCATCATAAGAGCTGTGGACACCCACCACACCATGGTAGGCTGCTGTCAGGCACAGTGTCTCATGGGTGTCTCCATCATTAGTAATAGCTATTCCTCCTCCAAGGCCTGCTTACAGAACAACATTTGTGGGGAACGAGGAAATGTGTAAGGGTTGTTTTCATAGCTTGTTAAACCTTTATACTATTTGAGGAATATTTAGCAATATCAGTAACTTCCAAATATATCTGAGGAGCCTAAAAAGAGCTAAAGTAATTATAGCCATAATGCCAAGCGAGTCATCAGCTGGCTGAAGACAGTCGTTGTGTGTGTGCTTTGGATTTTTAAAATGGTGTTCCAATTGTAAAACTGCCTGTGGTCAGCACAGTTGCAATAAGCATGTGTCTCTTCTTTGGAGACCCAAGGCGATTTCAAGCAGAGCAGTGGGACGGCCGACAGCTCTCTTGTTCTCCCCCCACCCCCTTCATCCTCAGCACTGCCTCCCATGATTTCTGAAAGGACTTGGTGACTAGAAGTCTTCCAGTGAGTCTGTGAGGTTCTGTAACCTGTCAGGTAATAAGTCTAGGAGCATTTGGGGGCCTGGATCCTCTGGCGATTTCTCTCCCAGCTCTGTACACCTCTGAGATGGGAGAGAAAGGCCGGTGCCTGTTGGCATGCCGTGACTGAGGATCCCCAGTAGCCTTCAGAATCAACATGGGCTCACCGATGCTCATCCCCTTCTAGAATCTTCCATCCTGAAGTCAGGTTTGTACTTGAGGTGATACCATTGAAGCTCTGCTTCCCAGAGCATGGGTTTCTGACATGATTTAGATGTGCTCTTAGAGTTCGTTTATTCTCACCTCTCTCTTTCTCTCAGACTTAGCATCCTTTCTGTCCTCCTAGGCCAGGCTCCATCAGCCTTTGATGGAGCACTGCCTCTGATGGAGCACTCCAGAAACTAAGGAGTACTCTTCCCTGAGCAGCTATGCCCCTGTTGATTGATTGTTAGATGGTCACCTGCAGAGCTGGACTCTACACATCAGCCTGGTTTTCTCCTTGGTGTCTGTGTCCTTTGGAGTTCTTCAAGACAGCCTGGTCCCTGGTCTTCTGGAAGTGGTCCAGCCAATGACTAACGCTCAGCCCCTCCCCCACCCCTGAATTGGGATATGTGTCCACAGGCTCTCCCCTCCCCAGCCTGTGAACTGAGATGGGTGCTCACAGGATCACCCAATGATTTCCCTTGCATTTGGCCCTCACACACCAGTCTGCCTCTGAATAGTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTTGCTCTTTGCCCTATTGGCACTTGTAAAACCTTCGCTGAGAGACGCTTAACAAAAGGCAACTCCAGCTCATGTGATTGCAGTCTAAGTATACAGTTGGTCTGACCTCAGAGTGGTTGTTCTGCTGTCAGGTACTTCCACGTGTCCATAGAAAAATCGTGAAAGGTGGTGCTACTGACCTTTAGCCTGTCGTGACAGGTTTTACAAGATCAAAATGCCTTTAAACTCACTGATGATGTGTGTAATCAGCGGCCGCGTGAGTTAATGCTGGACGTTGCCCTCTGGGTTTTAAAAACCTGGTAAAGTGATTACAGACTAATTAGAACAACCTGCTCTTCAGTCCTGCCAGATCCCTTTCCACACTTCTCAGCTGCTGGAAGAATGGAAGTTTCAGTCGGTTCTATTTCTGATATCACAGTCAGCCAGGGGAGCTGAGAACTGGGCATGTGCGAGGGGCCTGGGAGCGGTGCAGCGTGCACACAGCTGTGCTGGAAGGAAGGCAGCAGCGCTTGCGATCCGTGCACTCAGCACTATGGAAATGAACTTGGCCCACTCAAGAGCATGAATCAATGCCTAGCCGCCTTTCTAATCACAAAGCAGCTTCTATCTTGGGCACTTTTTAGACGTTCTGTAAAATAGACTGAACTCAACGCCAGATGACGGCCAGATCGGCCTCGTTTGGGCTTTTGCAGAAGTCTTGAGAAATTGCAGCCACATTTCTCTCTCTGTCTCATGGTCTTGATGACCTTTCAGCCTGATCCATGCAGGATGAGACATTAACCCTGCATATTAGACTCAGTATTAGGCTCAGTGAGCAGAGTTAGCCATTGCAGGACCTTGATGTCTGTGGTGGCCCAAATCTGTCCTGTAGTGTGTCTCTGGTATTCACCTCACTCAGGGTGCATTCCCTATCTTCAGAGCGGCATGGTATATGGAGGGCACCAGGTGCCACTCCTCCACGGACCCTTTAGTCTGGAACACTGGCTCCTCAAATTTATTTTTTATTACATTGGTTTGTGTTTGTGAGTTTCTGTGTTTCTCTGTGTGTATACACAGGTGTGTTTAGGCACACACATGTGCACATATCCATTGCCCTGGCACATGTGCGGCGATCTGAGGACAACTTCCTGGGGTCTGTTCTCTTCTCTCATGGCTCTTCTTCCAGGGCTTGAACTCAAGTTTTTAGGCATAATAGTCACTACCTTCATCCACTGAACCGTCTCCCAGCCTGCGTCTGATTTTTCTGAATACCACAATGAGTGGGCACTCAGTGCCCTTTCCATAGACTCTTGCTGTCAGACTTGCTCAGCTGATATTTACTGAGGACACAGATGATAATAAACAAGACTGGTAAGGCAAGGAACCCACATTCTAGCTGGAAAGGCATGCAGAAGAAGCTAGGTTTTCATTCTTAGTACTTCTCTTCAAAAGAGGGAGGGGCTTTCTTCAGGGAAGAGAAGGTTTTCGTAGAAATAGAATTTCACCAGGGAAGGAGGTTAGACAGGAGTTCAGGCAGGAAGGGGGAAATGGGCAAAGGGTTAGCAGCAGTGAAATGCACGGGCTGATTTCTTACACACTTGTACGCCAGTGACCAGAGAGCTAGGAGCTCTGAGCAGGCCCAGGGCTTCTGAGCTCCTTCTTCCAGAGTCTAGAGGTGGGCCAGGATTCACCCGCAATGTCCCCCCTTACCTTGTTCACTGGAATGTACACATCTAAAGATGGGAAAAATAACACTTTCCAATGAGGGCAGAATAATTAAAATCTCGTAGGCTGTGCCATGGGGTATCTGTGGCACTTGGTAGCTTGACCACAGCAGGAAATATACCTAATTCTCTTCCTCACTTTCTACCTTAAAAAAAAGAATCCTAACAAACCTGCGGTTGAAGGGTTGAAGGCCTCAGCCTCATCATAAAGTGTGTCCACTGTGATGTTAGCCACGGGAACAGTTTCTCTGACTCTTTCAGCACATTTATTAATATCTGCTATGGACTGTTTTAGGTCAGCGAACTGACAAAAGGCTCATGACTGTGTGGATCCAGAACGATCTCTCCAGTCCTTCTGTGGTGTTACAATATTCATTTATGTGTTTCCAACACCCCCGTATTTAGTATTCCTGTGACTCCGGGGGAATGTTATGAACTGTGACTGCAACTCAACCCTTTCCTGTGAAGCCAACGACCTAGTGTCCTTGACTTGATTCGAGAGTTTAATCTATTTTCTTGACTGGAGACTGCACCAAATCCCACGTAGAGAATCCTCTGAGTGGCTACCCCGTATGCGCCACGCTGCTGGAGTTGTGCACAAGGTGAAGAAGATAGTCTCTATGGTAGTTTGGAAAGAAAATTTGAGCTATGGGGCTCAAATGCAAAATCAGCAACTTATGAGCTAATTAAATGATAAATTACCTGGTAGTGCACAGTGACTACTTTACCACTGAGTTGACTCCTGCCGAGCAGACTTAACGGCTGAGCTGAGCTGTTTCTAGGTAACTGACATCAAGCAGGTCCTTATTTACAAAGATGTCTCATGGCACTTGCAGAATCTTTCTGGATGTGGGACACCCTTGTCATTGTGCCAGGCTGGGGATTCATTCAGAAAGTTTCTTATTGTCTTTTTGTCCCTTCACTTGAAGCTGAGATGCAAGAGACTTCTTCCCAACGCTGTCAATCAGCAGTGCCCCAGATTCCCCAGCCTCCGAGGGAACAGCTTCAGGCCACTGTCAGCCTCGGAGATCGAGGCTGCATCTTAGCTGTCACCAGCTAGCTCAGCAGTGACTTAGGAAGAAGCAAGCATTTGAATGATGAAGACAGGGCCTACAAAGGGCCCTTGCACCTTCTCTCCCAGCCAAGGAGAGCCTGCCTTTTCTTCATGGGGTAAATCTGGCTTTTCTGCTCGCCAGCACTTTCAAGTTCTTAACCTTGGAAGAAGATGAAACCTACAAACAGATGACATTTAGCAGGAACATAAATACATGCCCTTCCTCAATTGTTGACTTGAAGGGAGAGCAAACCTACTATAAACCCCAGGGAGGAGAAAACCCTATCTCCAGAATTCTGGGGTACCTCCTTTCTCACCAGAGTCAGTAAAGCCACGTTTGAAATTCTGTTCTTCTTTCCCATTCAGCCATGGGTAAGACCACATCTACGTTTCCCCTACTCTGGGAAGCATGGAGTAATGACTCATCCCTCCTGGAATTTGCACTGAGTGCAACTGAGAGGAACGGAGCAGACGTGGCGGCTGTCCTAGAGTTAGTGCTCTGTGCTTTGCCTTTTGCCTGGGAGTCTGAGGACAACTCGGAAGGCTGATCCACTTGAGTGCTTTCTATAGGACTGGCCGAGGATTCTTATGTGATGGTACCACACACACCCATCTTTCACAAGTGCGGGCCTATTGTATGTAATCTGAAAACAGTCATTTGACCTAAGGACACTGGACACAATTCGAATGTGTGCCACAATATAGCCTTCCGGGAACATGAGCCTGTAGCTTTTGTTCCACAGCTAGAGTTAGTTATCAGGAGCCTCCTGTTCCCAAGGCAGGAGGAAATGGGAGGTGCTCTCAAGGGGCTCAGCCTCATCCACACTACCACGAGCAAGGGGAAGTCCTTGGAAGAAAGGTTTAACACTGGAGTGATGGAGTCAGGGGGTGAAGGAATGCTTTCCTCTGGAGGAGCGGCGTCACTGTGGGGCCTTAGAGAGTCACAGCATTGAAACGGGTAAAGCACGGTTCTAGCAGTGGCTTTGCAAGCTGAAGTGAAAGGTTTCAGGATCGTTTGGTGTTTTACAGGCAGTGTGCTGAGCTGCTTATCACTAAGCAGACAGTTTCCCTGTTATTGTCTGGGCGTAATTGAGCGGCTGGACAGCTGCTGGTGGTTATTATAACAAAATCTCATTCAGTGCTGCTACCTCGCCAAAAAGTTTCTCTAAATTAAACACTGAATAGCACCCACCATCGCCCTTTCAACCATTGAAGAAATCCCTTTTACAGCTCCAGATTCTGAGATACCTACAGTGGTTATTTTTAAAAACTAGGCTGTGTCTTTATCTCCATTCACAGTGAAAAGGACTCAGATAAAAGGCAGTTGATCAAAGAATTCAGTTGCTGATGTAGGGAAGGTTGCTAGAGAGGATGCGCTGGGCTTTGGGAAGGATGGAAAAGAGCCCTGCAGGACCTCTCCCTGCCCTCTGCTCTGGGGCTGATCCCGATATGCGATCTAACTCCTGGCGACCACTAGTTGGCCTCTAGCTGTGCCATCTGCCCAGGGGTGGGAGCTTTGACTCAAAGCCAGAGTCAAACAAGAGATCTTCTCCAGTATCATACGTATGCAAAACTATATTACCCATTGTGAGAGATATTTTATATTGTATCTAGTGTATGTATCCAGACTCAAGTTGTATTCCAGTGTGTGCATTCCATGTGTATTATGTCCTAATCAACCAATCATCATCATCATCAAGCAATGATTTAAGTATTTTAAAAGAAAATTTCAGAATTTTTATTATTTTTCCTTTGATTACTTTTGAAATTTGTTTTCATTTAGTAGGAATAACTTCAATAGCCAATGATGGGGGAATTAATTAAAGCAGCCATTTGTGCTCCTTCAAAACTAAAAAAGAACCCAGGCCCAAATTATAAAGAATTTGTTGTTGTTCGTGTTGCTTGCTCTTTTTTTTCCTTGCTGTGTGACATAGGCAGCCTCAGACACTCAAGTCCTGGGATTGTAGCATGTCTTAAAAAGAAAAGTCTCTTGGATAAGAAAGGGGGGGGTTAAAATTTTCTGAGAGAAAGGGGGAAAAATACTCCAGACAAAACTCTTTCCGATGGTTTTGCGTTTCTGCTACTTCAACCCCTAGAATTTGGAGACAGTTATCCATGGAGCCACTGTTTCAGTCAGCTCAAAAGGTTCCCTAGCTTGCATCCAATTCCATTTTGCAGATACTTCAGTTTCAAATACTTTTTACTTATGTCTATATGTCTCTGTGTGTGTATATGTCACTGTGTGTGTATATGTGTGTATATATCACTACACAGGCGTGTAGTGACTGCCCATGGAGGCCAGTAGGGGTGGGAGGTGAGATCCTCTGGGGTTAGAGTTCAGGCATTTGTTAGCCACCTGATGTGGGGCTGGGATTGGAACTCAGGTCCCTTGGCAGAGCCGCAGGTACCCTCAACTGTTGTGTCGTCTCTGTCACCCCACTTTCCAGCCATTCCCCTATCATGCACAGTGCACAGACACATACAGCTTCTTGCTGACGTATGTGACATTGGTTAACATTAGCCTGAACTCTGCTGACTGAACAGTACCCGTGAGATGACATCAAAGTGAGCAAAAATGCAATTCACAGTAAGATCTTTCCCTTCAACTGTGCTGTCAAAGACTAAAAAAAAGAGATACAGTCCTTCTTTTTTTATTTTTAAAAAGAGCCTCTTTTTAAAGAAATCCAATTTGATGCTATTAAACTACAGCCTTGAATCTATAAAGTCCAATAAATGGATGGGAATTAAATTTACATTTCTTCTTATCAAATGTATCCAGGCTCCCTGTCTTGGATCGTTTCTCAGTAGCTTGCTGCTTAGTGTTACTACCTTTTAAAGTTGTGACATTTGGCCTGTTTCTTCCACTGGGACAG
Seq C2 exon
GACAGCTGGGAAGTCGTGGAAGGATTGAGAGGGGAAATGACTTACACCCAGGAGCCGCCAGTGCAGAAAGGATTTTTGCTGAAAAAGAGGAAGTGGCCCTTAAAAGGCTGGCACAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000029822:ENSMUST00000071728:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.468 A=NA C2=0.031
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF154091=PH_8=PU(16.7=38.5)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types