MmuINT0125215 @ mm9
Intron Retention
Gene
ENSMUSG00000032827 | Ppp1r9a
Description
protein phosphatase 1, regulatory (inhibitor) subunit 9A [Source:MGI Symbol;Acc:MGI:2442401]
Coordinates
chr6:5013991-5027615:+
Coord C1 exon
chr6:5013991-5014095
Coord A exon
chr6:5014096-5027479
Coord C2 exon
chr6:5027480-5027615
Length
13384 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAAT
5' ss Score
8.76
3' ss Seq
TTCTCTTAACCTTCCCGCAGATT
3' ss Score
11.34
Exon sequences
Seq C1 exon
GATTCAAGTCAATGACCAGATTGTGGAAGTTGATGGAATCAGCCTGGTGGGGGTCACACAGAATTTTGCTGCAACCGTTCTGCGGAATACCAAGGGCAACGTCAG
Seq A exon
GTAAATCTGAGGCTTTCTAATGAGCAACTCTGTGATGCTGTATTTTCATGGATGGTAATTTCCCTATCAATATTTATAATTACAATGGAAATTTTGTCTGAATACTAAAACAGTGTGAACACCTCTGTTGCTAAGCAGTATGGTGTACCTTACTGTTAACACAGTAGGAATTGGCACAGAGACGGAATTCCTAGTCACTACCTCAGTAAATATTAATTTCCTTCTCAATTTCTTTTAACAAAACCACCTTTAGAACAATTGGAATTGAAATGGTTGTTCACGCACCAGCGGCAAGCATTATTAGACAAGTAGGCTGAGTGATTTCAAGCAGTGTGTTGTAAAATTCTGTGTATTGTTTTTAAGAGTCAGCCAGGATCTGTCTTTGATGAATTGTACTTTTCGTGTTTAATAGGACAGAAGCTGCAGACCTTGAAAGTTCTATCTAGTGCTCTGATTGGGACAATTATGACTCTTAAATAAGAAAGCCATTTTGAGGCAACCCTGGTTAAACTTTCAAATCAGTTTTGATTAGTTTACTTTTTGATTATTTGCCTGAAGCAGTAAGGAAATAATACATGTTGAAACATGATAATGACTTTTTAAAAACACTAAAAGAGACCATGCTGAGTACCCTAGACCTTAACATATCCTGGCTGTGATACTCTGAATAAGAATGGCCCCATAGGACTCGAGCCCCAGGGTACCTTGCCAGCGAAGTCGCCTGACACCCGCAAGGGCCCACACAGTATTCCCCACGGGATCCTAAGACCTCTGATGAGTGGAACACAGCGTCTGCTCCAATCCAATCTCTCGGAACCTGAGACTGCGGTAATAGGGAAGCAGACTACCCGGGCCTGACCTGGGGCACAAGTCCCTTCCACCCCACTCGAGCACTGGGCTACCTTGCCAGCGGAGTCACCCGACAACCGCAAGGGCCCACACAGAATTCCCCACGGGATCCTAAGACCTCTGGTGAGTGGAACACAACTTCTGCCAGGAGGCAGGTTTGAACACCAGATATCTGGGTACCTTCCCTGCAAGAAGAGAGCTTGCCTGCAGAGAATACTCTGCCCACTGAAACTAAGGAAAGAGCTAGCCTCCCAGGTCTGCTTATAGAGGCTAACAGAGTCACCTGAAGAACAAGCTCTTACCAGAGACAACTATAACAGCTAGCTTCAGAGATTACCAGATGGCGAAAGGCAAACTTAAGAATCCTACTAACAGAAATCAAGACCACTCACCATCATCAGAACGCAGCAATCCCACCCCACCTAGTCCTGGGCACCCCAACACAACCGAAAATCTAGACCCAGATTTAAAAACATTTCTCATGATGATGATAGAGGACATCAAGAAGGACTTTCATAAGTCACTTAAAGAATTACAGGAGAGCACTGCTAAAGAGTTACAGGCCCTTAAAGAAAAGCAGGAAAACACAACCAAACAGGTAGAAGTCCTTAAAGAAAAACAGGAAAACACATCCAAACAGGTGATGGAAATGAACAAAACCATACTAGAACTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGCGAGGCAAGGCTAGAGATAGAAACCCTAGGAAAGAGATCTGGAACCATAGATGTGAGCATCAGCAACAGAATACAAGAAATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAGAGAACATCGACACAACAGTCAAAGAAAATACAAAATGCAAAAGGATCCTAACTCAAAATATCCAGGAACCCAGGACACAATGAGAAGACCAAACCTACGGATACTAGGAGTTGATGAGAATGAAGATTTTCAACTTAAAGGGCCAGCTAATATCTTCAACAAAATAATAGAAGAAAACTTCCCAAACATAAAGAAAGAGATGCCCATGATCACACAAGAAGCCTACATAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAACAACAAATGCACTAAATAAAGAGAGAATATTAAAAGCAGTAAGGGAGAAAGGTCAAGTAACATATAAAGGAAGGCCTATCAGAATTACACCAGACTTTTCACCAGAGACTGTGAAAGCCAGAAGAGCCTGGACAGATGTTATACAGACACTAAGAGAACACAAATGCCAGCCCAGGCTACTATACCCGGCCAAACTCTCAATTACCATAGATGGAGAAACCAAAGTATTCCATGACAAAACCAAATTCACACATTATCTTTCCACGAATCCAGCCCTTCAAAGGATAATAACAGAAAAGAAGCAATACAAGGACGGAAATCACGCCCTAGAACAAGCAAGAAAGTAATCCCTCAACAAACAAAAAGAAGACAGCCAAAAGAACAGAATGCCAAATCTAACAATAAAAATAATAGGAAGCAACAATTACTTTTCCTTAATATCTCTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATAGACTAACAGACTGGCTACACAAACAGGACCCAACATTCTGCTGCTTACAGGAAACCCATCTCAGGGAAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAAACAATTTTCCAAGCAAATGGTCTGAAGAAACAAGCTGGAGTAGCCATTCTAATATCGGATAAAATCGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGGATACTTCATACTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAATATCTATGCTCCAAATGCAAGGGCAGCCACATTCATTAAAGACACTTTAGTAAAGCTCAAAGCACACATTGCACCTCATACAATAATAGTGGGAGACTTCAACACACCACTTTCATCAATGGACAGATCGTGGAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGACCTAACAGATATCTACAGAACATTTTATCCTAAAACAAAAAAATATACCTTCTTCTCAGCACCTCACGGGACCTTCTCCAAAATTGACCATATAATTGGTCACAAAACAGGCCTCGACAGATACAAAAATATCGAAATTGTCCCATGTATCCTATCAGACCACCATGGCCTAAGACTGATCTTCAATAACAACATAAATAACGGAAAGCCAACATTCACATGGAAACTGAACAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAAGACTTTTAGAGTTTAATGAAAATGAAGCCACAACGTACCCAAACCTATGGGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGGAGAGAGCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAACAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAAGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTAACTACAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCCCCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAGCCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCATTAGATGCAGAAAAAGCATTTGACAAGATCCAACACCAATTCATGATAAAAGTCTTGGAAAGATCAAGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCAAGTAAATGGAGAAAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCATTAGTCACAAATAATATAAAATATCTTGGTGTGACTCCAACTAAGGAAGTGAAAGATCTGTATGATACGAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCTATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAACTCTTGTCAAGGATAAAAGAACCTCTGCTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCAAATCGATCCATACTTATCTTCTCGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTCTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGAACTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATCAAGAACTCAAGAAGGTGCACTTCAGAAAATCAAATCACCCCATTAAAAAATGGGGCTCAGAACTAAACAAAGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGACCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAATCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATACAATTTGCTAAACACATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCTTCCTTAGAAGTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATGTAGAGACTGCCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTAAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCATGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATTGCCTAGTTGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACTCCAGGGCCAAAAAGGGGGAGTGGGTGGTTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGAATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAAAAAATGGAAAAAAAAAAAAAAGAATGGCCCCATAGGCTCATATGTTTGAATGCTTAGTAATTATTTATGGAGTCACACTACTTGAGAAAGATTAGGAGGTGTAGCCTTCTCAGAGAAGTGTGTCACTGGGGGTGGGCTTTGGGAGTTTCAAAAGTTCAGCCAGGCCCAGTGTCTTTTTCTTCCTGTGGAACATACCTACTAATATGCATGTAGAACTCCTTCTCCAGCATCATGTCTGCCTGTGTGCTGCCGTGTTCCTGCCTTGATAATGGACTAAACCTCTGTACCTGTAAGCCATCCCTAATTGAATGCTTCCTTTATAAGAGGTTCCTTGGTCATGGCATCTCTTCACAGCAGTAGAACAGCGACTTAGACAAAAGCTATGGCTTAATAATGAACGTCCTCAATTTTTAATTCATATTCGAATCAACTACTCAATTCTTTACCATTAAATATCAGGGCACCTTACCATTCCGTGTTTTTTGAAGTAAAAATTCAATGTGTTAAAGAACATTTTTCTTCCCCGTAAACTTTGAGTCTGGAGCAGACCAGTTTGCTGACCCATGCGCTCTCCTCACTTTAGCAGAAAGTGATGTAAAGGAGCTGATGAGATAGAAGCATTAATCATGGCTCACTCAGATGGTTTGTATTTGGAATTTTTACAATTCAGTTGGAAGGTATCATGTCCACTGGGGTACAGCTCAGTGGCACTATTTGCACAGCCAGCATGAAGCATAGACCTCATTGCTGCAAAGGATGAATGAGCTGCTCATGGGATTTATAGTTTGTATGTAAGTAGTGAAAAGAAACAAATCCTGAATATACATTTGAAAATAAATTTTATCATTAAAATATTGCAAAAAAGTACCACACACTTAGATTAACCCTAGCCAAAGCCCTGTAAATTGTAGTGATCTTCTACATGTTTAGAACAACCAAGTGGAACAAAAGCTGTGAAGAGTCAAAAGGCATTTTATTCTTTCACTATCAAATATATTTTATACCCTTATCCATCACGCAAAACAAAACCAAAATATCCATGACAGGGTTAGAACTAGAAAAAACATTTAGTCTTATGTCAGCTTTCATAACTCTGTCAATGACCTGCATTCAACCCTTCGCTCATATCTAGCTCCTTTAAATCAGTTATTTTATGCTTTTCCTGTACTTAACTCAAAATCTGTTTTTAGAACTGTGATTAATAGGACAGTAATTACAATAAACATGTAAAGACATTCAGAGGTGGAGGCATAGTGCATAATCTCCATTCAAAGCAACAGTCAGTCGTTATCAGACAGACACTCTCAGAGCACCAAATACTGGAACTCATTATATGGATTTTATAATAGTTATTGTACCTACTGTGTTCATTTTACGAATATAAGAATAACACTTAGAAACATTGACATATTCCAAGTCACAGAACCACTGTGGCTTCTATATAATTATGGAATTATATTATTCCATAAGCCATTTTTTCTCTTCTAAATGCTTTTAACACTTAAAATATGCTATTCCAAAATATCCATATCCATAACAGAAATAAGCATGCCAAATTTGACATCTCACGTTGAATTCTTCATTTAGTAGGTAGATGGTATACATGATCTAACCTTACATATTTATGAACTCAGGTTAACATAAGCAGAAACATGTGGAGAGGTAATCTGAGTGTTGCATATTTTTTTCTCTAAGTTGGTCTTCTCATGACTTTAGGTACCTCAGCCCTCTTTTGTGTGTGATACGGTTTAGTCTTGATCACTCCTTCAGACACATGAGATTAGACACTAATTTTCACATAAAGAAGGTGAGGCAGAGGGATTAAGTTGTTTCCACTTCTGCATGGTTTTACTCTGGGTCATACTTAAAAGAGTGGCGATTTGTTAAAGAAAATCTCCACCATTCATGCTTAATGGTACTTCAGGCTTTAAAGATGTGTGTAACCACGGTCCTTTACTGTAGTAGCTCAGAAAAGCCGCCTAAATGAATGGGCATGTGTAGTTTAACACATTTAAAAGTGAAACCATTTTATGAGATCAATTATCTGTCATGAAGTCAAGAGGAGTTGCAGAAGAGAGGGAGTTGCAGAAGTGATATAAATACATTATACGCATATATCAAATAAAACAGATTAAAAATCAATGGGCTAAATGAAATGGATCTGAATTCTATTTTCACTTTGAGGTTGCATATTTATTAGTATGCATTTTTAATTACTCTGTCACTCTGTCACCTCATAGTAGATGAGTGATAGTCCCTAAAGCCTAACTATATGGTCCATTTAAAAATACACTTAAGTAGCCAGGCGTGTTGGCGCACGCCTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACAAAACAAAACAAAAAAACACTTAAAAAAAATCTGTGCATGATGACACACACCTTGAATCTTAGCACTTAGGAGGTAGAGACAGGATGATCTCTGTGAGTTTGAGCCCAGCCTAGTCTATATAGTGAGTTACAAGCCAGGCATAGCTGCACAGTGAGATGCTGTCTCAGACACAAACAAATAAACAGCAGCAATACACATAAAGGTCTGGAGGGATGGCTAAGTGGATAAGAGCAGTTGATGCCCCTTTAAAAGGACTGGAGTTTAGTTCCCTGCACTCACCTGATGTCTTACAACAACCCAATTTACAATAACTCCAGTTTCACGGGGTCTGATATCCTGACCTTTGTGGGCAACAAGAGCATACATGGTGCACAGACATATGTGTAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATAGATACATACACAGACACACAGACACACACACACACACACAGCATTCAAACACATACAATAGATAAATCTTTTTTAAAATACACATAAAATGCCAGTCTAGACTTGTCTTAAAACTGCTGTTCTAGGATGTTTAAATTTCTTTATATGTGACACCATTTCTGATAAACATGCATTTACCAAAACATAATAAATTCACACATCAATATTAATTTAAGACATTAATGATTATCTTATCATAGAGATTATATTATCTCTTAGTTAAATCATCTTGTATATCTTTTGGCAATCCAGAGTTCACATTTTATAATAGAAGAGGGGAAAGAAAGCAAAGATACTGTCAAACCTTTGTAATGTGTAGACAAACAGAAAAGAGGGAAAGAAGTCTGTGGTGGTTTAAGTAGGGTTGACCCCCATAGACTCCTTTGTTTCAATTTGCTTGGTCCATGGGAAGTGACACTATTAGGAGGTATGGCCTGGTTGGAATAGGTGTGCCCTTGTGGGAGGAAGTGTGTGAGTGTGTAGGTAGGCTTTAAGAACTCGCGGTGCTCAAGCTTTGCCCAGGAAGGAAGGGAGTTGTTTCCTGGCTGCCGTCTGACCAACATGCAGAACTCTCAGCTCCTTCTCCAGCACCATGTCTGCCTGCATGCTGCCATGACGATAATGGACTGAACCTCAAAACTGTAAACCAGCCCCAATTAAATGGCTTCCTTTATAAGAGTTGCCTTGGTCATGGTATCTCTTAACAGCAATAAAACCCTAATGAACACACAGTCAAAATGTGTTTCTTCATGGAGAATACAGTCTTACTGAGAAAAATCCTTACATATTTATTGAAAACTCATAGAAATAGTGCTTTAGTTTAGCTAGATTGCAGAAGACAGGGCAGTGTTTATGATTCAGTTTTATTCAACATTCTACAATTAAAAAAAAAATCACAAACTACTTGTAGATAAAACAAAAATTGGTTAAGACCTTGGACCTGAGAGAGTAACGATTAAGTAAAGACAGACATGTTCTGTGTTTACTGACTTGATGAGCTCATATTGTCAAGATGCCTTTTCAAAGTAACTCCAGAACAAATCCCAGTGGGCTCTGGTTTTCCTGGGAAACCTGGGAGACTGATTATAACGTTTCCATGCAAATGCAGACAAAAGACAGCAGAGGTCAAGAACTCTTCACTTACTTTAAGCGTTTACTGTATAACAGCCATGGAATTGGTGTATTGGTAGAATTATAAACACATTATGGAACAGACTGCAAAGTCCAGAGATCACCCCACAAGTGTAGAATCAACTAATTTGAAACAGTGTAGTCAAGTAATTCAATATTTGTAAAGAACAGTCTTTTTAACAAATGGTGTTGAAATTACTTGCTGTTTGGAAAGAAAGAAACCAGCCTTATGACACATTATGCCTGGAAATTAAATTTAACTTTAAGAAACAATTTTAAATTTAAGAAAAAATAGGAAATATTTAATCATAAAGTGGCAAAATTCTTAAGAATTAGAATTGATTGAAAGACATAATTTATTTCTGATGTCATTCAGCAGTTTATTCATTGAAAGCTACTCAGTAGTCCATCAGCAGTTGTGTGTTTATTATCGTGTTGACAAATAGTTGCTGGGAAGCTTGGATAACTTCATCACATCGTCAGTGTGAATTCACTTCTTCCCCATGGTGTTGTGGATGGTCATCTGTTGCAACAGACACTGACGGCTGTTTAAAAACACCGTAGACATAATTTGAAAAGCTGAGATGGGAAAGCATAAACTGGGAGAGGGTAGTAAATTAAACACATATGTACATATGTATACATTTTATGTGTATTCATATCTGTAGGATACATAGACAAAACATTTACCAGAACATATTGAGTTATGTCAGCTCAATCATAGAAATAAAGAACTCACATTTAGTAATGGACAAAAGTTTTGAAATAATTATCTCATGATTGAAAGACAAGATTGGAAGAAGAGGTCTGAGTGGTAAGCTTCGAAAGGATGGGTCCCTGTCGTGAGAGCAGTGACATCAGCAGACACCCACCTAGTGGCTGTCCCTGCAGAAGGTGCCTGCACCGGGTGTGGGTGAGGGTGTGCAGCAAATGTGGTTTCTGTGCACTGTGAGCTGACTATGAAATGGTACCCAGTTCTTCATAAGACAACTTGGCAACTGTTTGAAAAGTTACACATCCGTTTACTTCTGACTCGACTCCATTCTTAGTAACGCGTTAAAGGAGAATGAAAGCCTGTCTGTAAAGGCTCACATACTTATAATAACTTGATGCATATTATCCAAAATCCATCTTAATTTTTGAATTATTAATAGAAGGATATTTCTTCCAAGCATATTCCGTGCACAGTAAAACTTTCACTATACACTGCAGTTCCATTTAATTGAAACTTCAGAAGATTAATGTGGAGCTAAGGGACGAAGGATTCTGGGAAGCAGTCTGAGGAAATGCTTTGGGTGTTGATGGTCCCGTATTTTCACTGAGGTACTGATCACAGGCCGGTGTGTCTGTCATTTTTATTGAGCCAACCATTTAAAATAGATGCATCATCCTCTAGATGAATTGTATCTGACCAAAAATATGTAGGCTCCTACTTACACTTGATTGCCAACAGTAAATGAAATAATGAACAACTGAGTTTATGTCTAAGCTAAGTCTTTTTTGAAACCATGTGAAAGCACTTGGAAGAGGCAACTAAGAACGAAAGCTTTGGTCATCAGTGTCCTTATTCAGAAAATGGTCATCTGTGTTACTTAAGATTGACTAAAACAACATCCTATAATCAAGGATTGTTTATCAATTAAGTGTAGAAAAGACTAAGTGTAACATTTCAAATAATGATACTCATATTTAGAAACCATATATATATTAGACATATTATTTTCATTTTTAGAAAAATAGATTTATGTACTAACATGGAAGTAATGTTAAATAAACCACATTCTATTTACAAGGGCTGATCATAGATGACATGGCTTACAGAAAGTTAATGTCTTTCCAGTTTCGTTTTTAACTCAGTGTCTTATAAGATTAATATCAATTCTTGAATCACCCTCTTTTTAATGCACCCACTCAACACACACACACACAAGAGAGAAAGAGGAGAAAGAGAGACAGAGACAGAGACAGAGCAAAACTCTTCTATTTCTCCTACTTTGTAAAGTATCAAAAATCAATGCTCCTCCCCTAGCTACAGCATAGGGTCTACTGCAAAATGTTTTTTAGGCAGTTTTGTTTTGGGTTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTAGTATTGTGGGACATTGCTATAGAGATGTTTTAGGTCATTGGATACAGGAAACAATGTTCTGGCTTCCTTTTCTTAAGTCATCAATTGTGTGAAGAATTGTGACTTTCCTGAGGGTGTTATTCTTCATGGACAGTCCTTATTGCCACCCCTCTTCTACTTTGTTAGCTGTGTGTGTAACATCGCTTATCTTGCTGAATAATTCTGTCACCCCTTGGCTGTTCCAAATACATGGGTCATAGTATCTCTTAGTCTAAGTAGCCTGCTGCGAGCTTGAGTGTGACCACATTCATTAGCTGTTGTGACTGTACTCCACTAGTTTCTCTTAACCTTCCCGCAG
Seq C2 exon
ATTCGTTATTGGACGAGAAAAACCAGGACAAGTGAGTGAGGTTGCCCAGTTGATCAGCCAGACCCTGGAACAAGAGCGGCGACAGCGGGAGCTTCTGGAGCGTCACTATGCCCAGTATGATGCTGACGACGATGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000032827-Ppp1r9a:NM_181595:5
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.399
Domain overlap (PFAM):
C1:
PF0059519=PDZ=FE(41.2=100)
A:
NA
C2:
PF0059519=PDZ=PD(4.7=8.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: