Special

ENSBTAG00000024426 @ bosTau6

Biotype
protein_coding
Gene Symbol
PPP1R9A
Description
protein phosphatase 1, regulatory subunit 9A [Source:HGNC Symbol;Acc:HGNC:14946]
Coordinates
chr4:12038499-12381524:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
47
chr4:12352221-12352267
+
7.7
23.81
0
Alternative 3'ss
101
chr4:12352167-12352267
+
90.6
23.81
0
Alternative 5'ss
0
NA
+
58.36
64.97
0
Alternative 5'ss
444
chr4:12038542-12038985
+
41.64
64.97
0
Exon Skipping
1611
chr4:12040757-12042367
+
90.66
31.11
0
Exon Skipping
66
chr4:12289435-12289500
+
7.45
32.99
0
Exon Skipping
298
chr4:12352167-12352464
+
80.82
86.89
0
Exon Skipping
88
chr4:12362039-12362126
+
79.65
90.29
0
Exon Skipping
84
chr4:12362225-12362308
+
82.02
91.23
0
Exon Skipping
199
chr4:12375549-12375747
+
80.38
90.43
0
Exon Skipping
24
chr4:12378685-12378708
+
26.62
95.79
0
Intron Retention
921
chr4:12376834-12377754
+
11.48
27.36
0
Intron Retention
1924
chr4:12377875-12379798
+
19.84
43.7
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000108819 PPP1R9B 1-to-2
Human hg38 ENSG00000158528 PPP1R9A 1-to-2
Human hg19 ENSG00000108819 PPP1R9B 1-to-2
Human hg19 ENSG00000158528 PPP1R9A 1-to-2
Mouse mm10 ENSMUSG00000032827 Ppp1r9a 1-to-2
Mouse mm10 ENSMUSG00000038976 Ppp1r9b 1-to-2
Mouse mm9 ENSMUSG00000032827 Ppp1r9a 1-to-2
Mouse mm9 ENSMUSG00000038976 Ppp1r9b 1-to-2
Rat rn6 ENSRNOG00000008869 Ppp1r9a 1-to-1
Chicken galGal4 ENSGALG00000009686 PPP1R9A 1-to-1
Chicken galGal3 ENSGALG00000009686 PPP1R9A 1-to-2
Chicken galGal3 ENSGALG00000013233 LOC395762 1-to-2
Zebrafish danRer10 ENSDARG00000061304 ppp1r9a 1-to-5
Zebrafish danRer10 ENSDARG00000063580 si:ch1073-219n12.1 1-to-5
Zebrafish danRer10 ENSDARG00000071709 ppp1r9bb 1-to-5
Zebrafish danRer10 ENSDARG00000074575 si:ch211-269i23.2 1-to-5
Zebrafish danRer10 ENSDARG00000079366 ppp1r9ba 1-to-5
Fruitfly dm6 FBgn0010905 Spn 1-to-1