MmuINT0131360 @ mm10
Intron Retention
Gene
ENSMUSG00000038831 | Ralgps1
Description
Ral GEF with PH domain and SH3 binding motif 1 [Source:MGI Symbol;Acc:MGI:1922008]
Coordinates
chr2:33146570-33159036:-
Coord C1 exon
chr2:33158910-33159036
Coord A exon
chr2:33146651-33158909
Coord C2 exon
chr2:33146570-33146650
Length
12259 bp
Sequences
Splice sites
5' ss Seq
CAAGTGGGT
5' ss Score
4.82
3' ss Seq
CTCCCTTTCCTCTGAAGCAGGGG
3' ss Score
6.58
Exon sequences
Seq C1 exon
GCCCCTCTGCCGGCTCCAGCTCAGCCAGGTTCCGCCGGAGGCCCACCTGTCCAGATACATCTGTGGCCGGCAGCCTCCCCACACCGCCAGTCCCCAGACACAGGAAGAGCCACAGCCTAGGCAACAA
Seq A exon
GTGGGTGACTTGACTGAGAAACTCTCTTCTGGGGTGAAGGAAGGCTGGGCCCTTCCCCATCCTCATTTGGAAACTCTTGATGCTCTTGGCAGACACACTCTCCTAAGGCTGGTGTGAGCGTGGGAATGCAGAGGCGACAGGCTGCAGTTTGTATGCCGCCTGCAAGGGACCTGGGCTCAGTAGCTAGTGAAGAACTGTGCAAAAGCTCAGTTGACCGCTCATTTAGGGAGAACTGAGTCCAGCAGACATCAAAGACTATCCTCAGGGCAACAGTAGGTGTCTGAGTACCTGCTGGTTCACTGGCCCTCTGGGGCCCCCAGCTGGGGCACATACACGTCCTCAGCATTGCTGGGGAAAGCCACACCTTTATCCCCTGGGGCACCCTTTGCCCCTCCCTTCCTCCCTCCTTTCCTTCCATCCTTCCTTCCACCTGCATCCTAGCACTAAGGCACAGATGCCCTGCCTCTTGGCTGGTCCTTGTGGAACTCAGAGGCCAGAACAGGACTAAGTGTGTAGGGTCCCCAGTGCCTCCTCTTCTCCAGACATTGCCACACACCCATGGTCACCATCTCACTGACCCATGCAAACCTCTGGGCAGCTGCTGCCATGCTCACTGTATATCTAGCTGGGGTCACGAAGCTCTGATGCTCCTCAGGGTGGCCTACGGGCCTGTCGCCTTGGCCTCATCTCACAAGCCTCACCATCATCCTGAGACACAGGCAGGACACAGGCAGGGCAAGCAGCATTAGTCTCCATTGACAGAGGGAGAAGTTGAGGCTCAGAAAAAGGATGTGGCTTGCCCAAGGTCACACCATAAGAAGAGGCTGAGCCTGGTGCACCAATGGGCTCTGGGCAGAGGCGTCTCCAGCAGTAAGTCCCTGGCCCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTTCTGGGGCCAGCGCCGCTGTGCTCCCAGGATAAGGAGCTGCTTCTCTCTTCCTCTCCGTTTTCCAGTCTGATGTGTCAGTTGAGTGTAGTTGAAAGTAAGAGTGCGACATTCCCATCGGAGAAGGCCAGGCACCTGCTGGACGACAGTGTCCTAGAGTCCCGCAGCCCCCGCAGGGGCCTCACCCACACCTCCTCCACCGCCATCACCAACGGACTCTCCCTAGGTAAGCGTCTCTGGCCTGTGCATACAGGCAGGGGCAGCAGGCCCAGTTTGTGCTCTGTGTCTGTCTCTGTGTCGCTGTACTGTGCCCAGTGGCCCCTCACCCTTAAAGAATGGCTCCCTACAAGAGTCTTCTGCTGCAGGAAGAGCCCTGGCTTGGCCTTCTCCTTCTGGTGGTCCCCAAATGGACAGTCAGATTGAAGAAGGAAGCTAGACTTGAGTCCACCTCAACCCCTGAGGCCAGCTGCTACCTTGGTGGCATTTATGTCCCAGGGGGATTCCAAAGCCTTGCTTGGAGCAGTAGGTAGGTGGTCCATTGCTTCCTGCTGTATGCTTAGCTGTACCCAGAAGGGAAGATGAAGACTTCAGGAATGGCATTACCCTACTGGACAGAGGCAGACAGAGAGTCTGTTCCACGGAGTTACAGACACAGGGCTGCTGTTGCCAGCAGATAAATGTTAATATTAGTGGCTGAGGCTAGCTCAGAACTGCATTCAGAGATCTCAGGTCATCTGTGACAGGTGACACTATCCTATGATTGCTGTCACCAGCCCAGTACTCTCTTGATGGCCCTTGCCTTCCAGTGTCCCTGTGTGATTGTCTGCCTTACATAGCAGAGTCCTCCTAGCAACGGTGGTGGGCTGCTGTTGGACCTGGTGAAGACAGTGGGGCAGAGGGCCAGGAGCTTGGAGAAGCAGGCAGCAGGAACACCAGGCGGGCATCTCATGCCACAATGTCCCTGGTGTGGGAGTCAGGAACAACTTTAGCACAGGGCAGCTGCCTCCTAGCAATGTTGTGATGAAGTCTCATACCTGCCTTATGTCTTCAGAAGAGCTCATCCTGTCTGGCCACAGGCCAAAGTATAGGAAGTGTGGACATTGCATTTTAGGCTCAGGTGTGGCTTGGAAGAAGTGGTTCAAGCTCCTGAGCTAGGGAAAGGTAATCAAGCCTCTTTCTGAGCCTTCGCTGTGTTCTTGGGCACTGATCCCTCAGCCTCGTAGGTTCCACTCATGGACCTCATCTTAGAGTATAGGATGGGACCTGGGTTCTTATGAGACTCCATGAATGCACAGTTGAGCTCAGAGCAGCTGTTTGATATCCAGGAAACTCTGAGCTGTGCCTGAATCTGGGCTGCCGTTCCTGAGAGCCAGTCAGGTGCTGTGCTGTCCAGCATCCAGGGTAGATCACAAGATTGCTTGGCTCCGGCTCATCAAGTCAGGGAACTCAGGACATTTTCTGCTTGAGCTGAAAGGTCTGAGAAAGTGGCAGAGTGTGTGCCCTAGTGGATGTCGTGCTAAGCTGCACTCCCCCCACCTCCAACCCATACAGCAGGGAATAGGGGTTCTACTCAGGCCAGGCTCTTTACCCTTTCCCACTGTTTAGTCTTAGAGATTTTTCTAGCAGGGCTCTGAGCTTTAGAGCCTACATAGTCTAAGACAATACAGAGGCCAGGCCCACAGATGCACATGCCAGGAGGGAAGCCGAGTGCTGCTCACTTAACAACACCAGGCCTCGTGAGCCAGGTTGTCCCACTCAGGCCCAGCACACCATGGTCAGCTCTAGAAGGTGGGCCTGGAAGAGACTAGGAAGGCAAAGGATCCCAGCTTAGGCCTTAGCACTGACCTTGGGCAGGGGACTGCACTGACTGACTCTGTGGGCAGGGGACTGTACTGACTGTGAGCAGGGGACTGCACTGACTGTGGGCAGGGGACAGCGCTGACTCTGTGGGCAGGGGACTGCACTGACTGTGGGCAGGCGACAGCACTGACTGACTCTGTGGGCAGGGGACAGCACTGACTGACTCTGTGGGCAGGGGACTGCGCTGACTCTGTGAGCAGGGGACAGCACTGACTGACTCTGTGGGCAGGGGACTGTGCTGACTCTGTGGGCAGGGGACTGTACTGACTGTGAGCAGGGGACTGCACTGACTGTGGGCAGGGGACTGCACTGACTGTGGGCAGGGGACAGCACTGACTGTGGGCAGGGGACAGCACTGACTGTGGGCAGGGGACTGCACTGACTGTGGGCAGGGCACTGCACTGACACCCCCTTGCAGCCTCCGTGCATCTCTTGTGCAGGCAGATCCATCTACCTGTCCCTTGGGCCAGAAGTGCTCACCCTGCCTTTGCCCTCAGGAGAGCCTGTGGGGCAACAGGCAGGCATCAGTGCAGACAGATGTGAGGACCCTGGCCTTCCAAGCCAGAGGGTAGGCAGTGGGAAGGGAGTGGAGGGTACTCTTGAGAGCGGTGGGACTGAATGTTCTTTGAACCTCCCCAGAGAAGAGACAGACATAACAACAGAAACTCAACTCCTTTTGTGACCCACAGGGTCAGAATGCTGTGAGCTTGGGGACCGGGGCCCAGTGACTGGGAGCCCAGGAAAACAGGCCCCTCTCTTCGAGGCTGCCATGCTCACTGATCTGTGTTCCTTTTCCAGGCAGTAGTGAGAGCTCAGAGTTTAGTGAAGAAATGTCTGCAGGGCTGGAAAGGTGAGTGTGGCCTCAGCAAGGCCTCTCAGGGCCCAGGGAGCTGGAGTCAGGGGCCCCTCCCCAACCATTCATGACATATGCATAATTACATGGTCACACCTCAGTGTGCACATAGTAAACACTAATCTCACACTTACACGTGCACACAGGTGGACACATTCATAATTCAGTTATACACTCATGCATTTGTGGATGTATACACAGGCTTAGAAAGGGCTCTCTACCTGCTCCCTCCCTTCTTTTGTCAGTTGACACTCAGAGCACTTGGTCCAAGCCAGCTAGAGGAAACCTGGGAGCCTGGTAGGCCTGCAATGAATCCTGAACCTCTAAGCCTGAGGCCTGTTGGAAGTCTTGAGATGGGCATGTGGCTCCATCTAGTGATACCTGAGAGTATTGCACCAGTGCAGCCTCAGGCCTCGGACATTTTTGAACCCTACCATGCGTGGTTGTGACTCCCATCAGCCCATCTGTTCCAAGTATGCACGCTCCCATCCGCCTCTCATCAGGAATTCACCTGCAGCATGTATTCCATGTCCCAATACTTCTTGGGCCACCATGAGGAATCCAGGAAGACTTGGCAGTGCAGGTGGTGAAAGGTACCTTGCTGACTAGAAGTCTGAGGACACACAGGGAAATATAGTGATGAAAAAGATCTCCAAGGTGCAGGCTTCCATTGGCCTTCAGGATGGTTCCTCCACCAGTGCCTAGGGGACTGTGTGCATCTGTGTACTCTCACAAGTACACATGCACAAAGTTATATAGCCTTATGTGTTCATGTGCACAGTTATACAGTTTAGCTATAGACATGGCCATGGTTACACAGTCTTACATATGCCCAATCTCATCCATAGTCACACATTTGCATGTATATATACAATGCTTATACCCAGTTACATATGTACAGTTTCACTGTCACACCTGTGGGCGAATACTAAACACAAATCTCACACACATGCACACAGGCAGACACCTCCTTAATTCATTTATATACTCCTGGGTGTCTGCATTCGCCTGCATGTGGTATGCACTACACCACACAGAACATACACACATGCACCTGGTGTGAACGCTCCTTTTTTGAAGCTAGGGCTTCAGTCCCTGTAATTGGAAAGTGCCCAGAAGTCATCCTATCTGTACACTTCCAACAGAGCAGAGAGACTCGTTGGCCCAGGCTGGGCGTTCCCTGTGCACAGGCTCTGTCTGGCCACTGCCATGCATAGACTGCCTGCAGCCTTGACGCTGCCCCATAGCTGTGAAAGGAGAACCCCACAGGCCCCATGGGACAGACTCCAAAACTCTTGGTCCAGGTGGGGATTCCTGGGGCCACCTTGTAAAAGAAGGCCACAGGCAACCCAGTGCCTCCCCTGGCCACTCCAGCAGCATGCTCAGGCATGGTGCCGAGACCCACAGCAGTACACCTGGGTGTTGTGTTCCCTCCGTTGTTTGTCCTTTCACTCATCCATTCCTCTTCTCTCATCAGTCACTCGGTAGCTGCTTAGTTAGCACGGCTGCCTGCACGGGAACCATGTAGGCAGGCTCTGTGGGCCCTGTCAGTGCTGACTGAGAGTGGAGCCAGCAGGAAAGAGGGTGCCATGGGGGCATGCCTTGCACAATGGAAATGTATGCCATCATGACCACTACAGGCAGCAGTATTTTGTACGATCTAGGTCACTGAATTTCTATAGCATATACTCTCAAGTAAACTGTCTCTGAGCACTGGCCGCCTCCTGGCTCTTCTATGCATATGCCCAGCCCTTGAACAGCCCTGCTCCCAGCTGCCTTTTCTCTGCTCTGCAGAGGGGATCTTGGCCTACTGTTTCTTGGCTGAGGAGATAGATATCAGTGGGGCTATGATTGCATCTCATCAGAACCCAGCCCCAGGCAGGCCAGAGGAGCTAGAAGCTAGCTGACCCTCACCCAGGGGTCCAGCTAAAAGTCTGCTCCCACTGTGTATCTGCTCTCGTGCCTGCTTCAAAGAGAGTCTGAACAGTCTGGGCTTTCCTGTAGACTGGGCACACAGAAGAGCACCACGTTGTCTCTTCACAGCTCAGTTGCCATCTTGCCACTTCCTGAGCCCCTTTCATCCTAACCTTCAGGCAGCCAGTGCTCAGCCCCACTGGATCCTCTGTGCACTCCCAGGTCTCCTCCAGACCACATGCCCCTCTTCATAGATGAGTGGATTCTAGGTCTCCCCCTGGCCGGTCCCAGAGGCCAGCATCTGCCAGAAACAGCCTCCCTGCCAGATCCTCACAGATACTATAAGGCGTATTGCATGCTAGAGCAGAGGCAGAAGATGTGGGATAAAGGTGCAGAAGGGAGCTGGGCCCCCTCAAAGGGATGAAGATATGAAGAGGGATTGGGGGTGTGGCTAGTGTGCGATGGAGTCCAGAAACTGTAGTCTTTAACTGGGTAGCCCCTGACCCATAGCCCCCCAAGCTCTGGTTGTGAGCTCTATCCAAGCCAGGGTGGAGCAGAGCCAGGCACCGATGTAAACAGCAGAGAGACAGCAGAGCAGGGAGTAGAGTAAGGATGCCCAAACTTGTATGATTTTATCGGACAGCCCTGACCTGCAGGGGTGAAGGTAGGAGGAAAGCCTCATTGTGTGTGCCACCTCCCTGAGGAGAGGGCCCCACAAGCTTATTGTGTAGAGCACAACAGCGCTCAGTGACCTGGAGGTGAGTACCAGGCTGGGTTCTAGACAGCCTCAGGCCCTAGAGACCAGGCAGCCTTGGGGCTTGGCCAACGGCCACTTTTATACTTAGATTGAAAGGCTCTAAAATGAAAACAGAAATATTACCCTTAGGGCTAAAGTATTTTTTTAAAAGAGATATATTGGGGGGGGTTAAAATATTTATTTATTTATTTATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGATCTCATTACAGGTGGTTGTGACCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAATCAGTGCTCTTAGCCACTGAGCCATCTCTCCAGCCTCTAAAAAGAGATTTTTAAAAACTACTCTTTTTTTTTTAATTTTATTTATTATTATATGTAAGTACACTGTAGCTGTCTTCAGACAGACCAGAAGAGGGAGTCAGATCTCATTAGGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCTCCAGCCCCTAAAAAGAGATTTTTAAAGGAGGAATGAAGGGTTATGAGGTGGGTAGAGACAGGAATATGGAAACACACAGCGTCCTTGGCCATGATTATCTCTGCTTCACAGGATTGCCACCCTCGTATTCTGTAAACTTCAGCAATGTGTCAGTCTCATTTCTACTCAGAAAAGTAATTGGCATTTGGCATTCCTAAAGATGTCCTCAGAAATGTTCACTGACTGTTTCTGAAGAAGTGACATAGCAAGTCTGTCAGAATTCATCACAAATCCTCCCCAACCCTCTTCCCAGACAGACATTGCCAGGTGGTTGGAAGTGGACAGTGGGGGTGGGCAGTGGTGAGCAGTAGCAGGCCTCGAGAGAGTGAGTCCCTTTAATGGAAGAGAGGAAGGGGTGGTACAGCTCTCTCTACAATAGTGGGTTGTCTTCTATCCCTGCAGGGAGTTGGGACACAAGAGTTCACCCAACACACAGTGGTTGTCCAGTGGAGTACCCTGTATCAGCTGCAGGTTCAGGCAGCTTCTTGAGAGTTGGTAGTTAACAGGCATGAAAAGAACTCTGGTGAGCCTTTGTGATGGTCCTGGGGCGTGAGGATACAAAGTAGATTCTAGGTCATGACCTGGGGTTGGAAGGGTGGCCTGCGAATGCTCAGAGTTTCTGGGGGCCTTCTACAGGAGAGGGTTCTCCCTCCACATTATGTTCTGCTAGCTTGAGACCAGGAAGTGTAATGTCAGAGGCCTCTGAGTTCCTTGGCTGTGCATTAGAGAGACACATGATGAACACTCAGCCCAAGTATGGAGCTGCTACAGGAGAACTGGGTGTGGACTCTTAGCAGTGTGCCATAGTGGGTGCTTCTGCCCAACAAGAAGATGCCAGAGACAAGGGCCTCAGGTTGCCATTCATAGACTCTGTATGGACTGGAATGAAGGCGGTTTACACCAATCACTGCTACTATGGTAGCACTAGTCTGGGGAGGGTCCTTGTAAGGTCATTGATGCAAGTCCTTCTCTGCCCTGGGTGAGGTTTCCTGTTGGTCTTAGTGGAATCACACACCATTCTTACAAGAGCAGCCGACAGGGGAGTCATGGTAGCAACAGAGGGCCAGATCTGCCACCCAAAATGGTCTCAGACATGCATCCTTCCTTATATGGTCAGAGGACACCAGGAAATGGGTCCAATCTCCCAAACCCCAAGTTTTGCTTTATTTGGAGAGAATTAGGCCCAGCTCTGGAGCAAGCGGTTCCCTCCACTGTAGCCCACCTGTGTGAGTGACAGAACTCAGAGCCCAGGAAGGGTCTCAGCCCTCATTAGGGCTCCCTGGCTTCTGGCTTCTGTGGGCTCGCCCATGTGCATGGATTGAGCTTCCTCGCCCAGGCTTACTGGGTGGCGACCCAGTTGGTTGACTTGCTAAACTAATTATATGGTTCTCTGAAGACACCATATCTTGCTTTACTTCCTTAGAGGTGAGTGAGGCCCCTGGCAGACTCCTCTGGAGAAGACTGGGCAGAGGGGTCTGGGCTTAGAGCTTCACCTCAGCCATGGTAATCAAGACTGTGTCCTGTCAGTCAGCAGCTGCTTCATGGGGAGCCCATAGCTTCACGTTCTAACTCCTTCAGAGCCAGTGTCTGGAACTGGATAGGCCATCCTTCTGCCTGCCTGTCTTTCCTGCTGCATCTCTGGGGTGTTTACTGTTTCTACTGCATCCCACATTTCTGAACCTCGCAGCACACAGAGGGTATTAGATGCCTCACAGTGCCTAGACACCTGCGGTGGTTTTACGCAGCCACTGAGGCCGATTTCCAGCCTGACCTAAGTCCTGATGGCCAGGAGAGAAATCTGGCTTCTTTTACCCTCGGCCACTCAGGGAAATATGCAGCATTTTACCAGTGTGGTTTCTAGGCACTATTTAGTGACTCCAGGACATTACCCAAGAAGGCCATGTGCACAAGGAGAGTCAAGTCCTTCAGATGGGGCTCCTTGGGAGTCAGGTTGGCATTTCCTGCCCACGAATGAGAGAGACTCACCTGTAAGTGACTCAGTGCGACTGGTGGCTTCTGTGGGGCCTGCCTGGGAAGTCAGCACTGCTAGTGCACAGAACCATGTGGGCCTTTCCACGCATCACTCCCAGTGCGGTTTGAGGAATTTGAGACAGGAGAGTGGTGTGGGAAGATGGCTTTTTGCTAGGGCAAAGATTCCAAGGGCCTAGATATAATTGTCACCTAGATGTCTCCTATTCCTCCACCTCCTATATGAGCAGGCTGCCTTATGAATTTCAACTTGGAGACACCCACAACCTGGTGCAAACCTAAGAACCCATCAATGCCTTGTTCAGCCCAGGTGCTCATGAGGCCAGTGGTACAGGCTGCTTCCACCTGGGCTCCTCTTCCAGTGTTGTGGCCTTGGGCAAAGTGACTCCCCTCCTGTAAGCCTCAGAGTTATCTACGAGGCAGGGCTAGAGCAGTGCCTACCTAGTAGTGCTCTGTGGTTCAGTGAGGCAGTGAATACTGCTGACTGAGCACATTGCCTTCCCCCTCTCCTCCTCACTCCCACCATCCTCTCCACCTCCTCTAGCCTGGCAGCAGCCATCATCTCATCTAATCGCCATCATCGTCACTGTCATTGTCTTAGGAACCCTGTGGGAAGCTGTTCTGTTTGGTTGCTTGCCTACATCTTCCCTAGAACAGACATCCCATGAGCCTCTGGTGTGGTATACCTCAAATCCATGGAGGGAGTCTGAGAATGTGTGCTCAGCTACATGTTCTCAGAATGATCCTAGGAAAGATTCCTACGGCTGTGGAGTTGGGGCCCTGTGATTTTGGGGGCTCATTAAATCCTGTTGTACATTTGTTCTGCATTTTGTGGTATTTTAGGGCAGTTTAGGGAGGGCCCGGGCTGCCCAGTTCCTGGGGTGGAAGATCTGGCTGCTCCAGGTTGGCACAAGCCTCCCCCAGCTCATGGGGAGAAAAGGGTAGATACTGCCCTGACTCTCTTCTAAGGGATGGGGAAAGGCCACCATTATGCTGCCCTTTCACACCTGGGATTGCCACATGGTTGCAGGGACAGGCTATGATGTTCACCCGCCCTGTGGGACAGTGAAGCCTTTCACTCCATGTTGGAAGCAGGCCTTCACTAGACACTTGCACCTCCATCTCAACAGCAGGCCAGCATCTCCTCTGGCCTCGGTGTCTTCATCTCAAGTACACATGAGAGCATCACCCCTTCTGTGGGGTGGGTGTGTTCTCGAAAGCATGCGGATGGCACGTTGTAAATATCTGACAAGGCAGAGATGCTGAAGTGCTGGGCAGCCCCATGCAGAGCACAGAACTGAGAAGTGCCCCACCCGACCCGAGAAGATCCTCACACTTAAGAATTTCCTGGCTGTTTAGCCTCATGGACATGGACACAGACACAACTGTGGGAGCTGTGACACTCAAAGTAGCAGCACGTAGGAGAGTGGAATGTTAGCCAGGTCTGGCACAGAATTTAGGCATGGACCCAGTGCCCAGAGTAGGCCCCAGTGTTTCAGCCCCTGCCTCTCTGAGCTGTAAAATGATCATGTCTGATGGTGTAATGAGGAGTTTGAACTGTAGTCAGGCAGACCTTTATTCAAATCTTCGTGTAGGAGGCTTATACCTTGGACAAGTAGCTCCTCATTGCTTGCTGAACCTCAGTTTCTCCCTTTGGGAAGGATAAGAGCTGTGCTTGAACAAGCACAGCAAGGATAATACAATGCTGTTGGACTAGCACAATGAGTCCAACATACGCACACCACTGCCTTAGCCTCTCTGGTCTGTCTGTGTGACCTCAAGTGAGTGAGATAGCTCTGTGTCTCTCACACTGGACTCCCCTGGAAAGGGCCTGTGTGCCGACTGCCTACCAGCCTAGACTGCTCGGAAGTCATGGATTTCAGGTTGCTCTCTGTCCATTCTAGCAACATTTGTCAAGGATGCAGCCCCAGGTGACCTCACAGAACAGGCAGTGCCTCCTGCTCGCCACCTTGGCAACTTCAGACAGTCTTAAGTTCTACCACCTCAGAGCAAGAGGATGGTAGAGGGGAAGCTACCACTCCCAAGTGGGAGTCCTGATTAGCAGAGGAAGGGGTATCTCTTATGCACAGAGAGCTACAGAGGACAGCACTTGAGAAAACTCTGTGGTCAGAGCTGGCTCTGAAATCCCTGTCAATGGCTGGGAAGGAGAGCCACCAAGGAGAGCGGCTGGTCAGCCAGGGCTGACATGTGTCAGGGACAGGGAGTAGTGATACCTATGCATTCCACCCACTGGCAATTACAGCAGGTGCATGGGTCTCAAGGAAGAGTGAATCGGCATGTACCCAGCCTGCTGTGGATGGAGGAGAAGGGGACAGAGCAAGGGTGAGCCTGTGACCACCCAGAGACCTGCTCTCTCAAGGACTTGGGTTAACCAGCACTTAAAAAGGAAAGGCTGATGGACAGAAGAGGGTGATCCTGGAGCTACCAACACAGATGACCAGTCCTGAACTTGGGCTTCTGAATATTAGACCCAAGATGGCAATCAGAATGTCTCCTAAGTTGGAGGATAGACACCTAGTCTGCATGATATTCATGGCTTCAATGAGAGGCAGTCCTCAGGCCACATACACTAGAGTCACTGGCAATAAACAGCAGCCCAGGCTAGCTGGGGACAACAGAGAACACATTTGGACAAGGAGAGACGTTATCTGGTTCTATACCGACAGTTCTGTCATCCGCTGGCCATCAAGCACAGAAGCTAGAGTATGCCTCATAGGAAAGGACAGGGCTAGGCAGTGCCTGCCACACCCCAAAGAAGTGGAGCTGAAGTGTCACACTCCCCTGACTGAGGAGCAGGGGAGAGAAGCCAAGCCAAGCCCACAGGGAGGCCCTGGAGTCAGAGCCCTTGGAGGCCATCAAGTTCCAGAGGCAGTTTCAAGGACACTGGAGCCAGCAAGGAGCCAGTGCAGAGGTGAAGTGTAGCAACGGGATCCAGAAGCATCCTGGAGAATGTCACTGCATGTGACCTGGCCAGATGTGCAAGATTGCTTACCATTCTATGCTGTGCGTGCGTTTGTCTTGGAGCCTGTGGACAGCATGGCATTTCTGTTCAACAGCGCACCTCAGATTCTCTTTGGAGGATCCAGGAGAAGGGTGAACAGTCAAAATGTTGATAAAATTGTCAGTGAGACCCTCGTGCTCTCCTAGATGGATACTTGGAGGGAAGAGTCTTCCCTGGCCAGGTGGCTCCAGATAGATCCCAAATGTGCTGTGGTGGGAGCAAGGAACCCAAGGAGGAAGCGGGGAGGGGCTGGGCTGACCTACACTGTCTGGGATGCTCTTGCCTCCTTAAGGATCAGCTGGGTTTTCCAGACTGACTAAAATTAACTCCCTTTCCTCTGAAGCAG
Seq C2 exon
GGGACGTCTTTATGCCACGCTGGGACCTAACTGGCGGGTTCCAGTTCGGAATTCTCCCAGAACTCGGAGCTGTGTCTACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000038831:ENSMUST00000042615:11
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.907 A=NA C2=0.180
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types