RnoINT0023701 @ rn6
Intron Retention
Gene
ENSRNOG00000034200 | Atp8a1
Description
ATPase phospholipid transporting 8A1 [Source:RGD Symbol;Acc:1309619]
Coordinates
chr14:42059132-42079344:+
Coord C1 exon
chr14:42059132-42059220
Coord A exon
chr14:42059221-42079271
Coord C2 exon
chr14:42079272-42079344
Length
20051 bp
Sequences
Splice sites
5' ss Seq
CGGGTGAGC
5' ss Score
8.19
3' ss Seq
GCTTTATTTTCCCCCTTTAGGCA
3' ss Score
10.37
Exon sequences
Seq C1 exon
GTTAAATACATATTTTCCGACAAAACCGGGACCCTGACGTGCAATGTGATGCAGTTCAAGAAGTGCACCATCGCGGGCGTGGCTTACGG
Seq A exon
GTGAGCATTTCCCTTATCTTGGTATGTGAAGTACACATTTGACTCTGTCCGATTGGAATAGTGGGAAATTCTTGTGTAAGGAGGGCTTGGGTTTTGTCTTTTAATCTGACAAGTGGCTCTTTTTACACAGGATGGATGTATTGTCTATTTTATAGCTGTTCTTGCTTTCCTTGGATGGTGATAGCAGATTTCCTGACTGATGGGTCTCCCAGGGTTTAGGACTAGGGAAGGTCTCCATCTGGGCCTGGTGATAAGGACAAGCCATTTCCCTTCGCTGTGCCCTGAGGTTAGGGTACAGCATAGATGTGGGAAGACGCGCAGGAGGAGGCCTCAGTCGGGTCCTAAGTTAAGCAACACTGCCATGGCTTTGATGACAACCGCTCCAACCTCCAACCCCCGACTCTTTTGTCACATCTCCTTTTTGCAGTCACAGAACAATGTAAGATTCTGGGGGTGGGATGAAGGGAGGGAGGGACAAGGACATCTTTAATCTGGAGAACAGATTGGGTGTGGCATCCATTTGGTTTCTTTCTCCTTATAGGTACGCACACCTAAACCATTCAGACACCCTCCTTCCGAGTGGCATGAGCCTTAGCAACAAGTTTTGCATTTCTCTCTGCCTCAATGAGGGAAGTAGATGCCTAAGTATCTATCATGCATGCTTTAGGCCAGTCCATCGTATACCCAGTAGTTCATTCATACTTTCCCTCTAAGCAGTAAGTCAGGGGGAAAGGAGCATAAAATGTTGGAAATATCTTTAACTAAATTTATCATTATTCCTACATGCAGTGTCTGCAAACAGGGATGGAGGACAATGTTTGTTCTTTAGGGCAGGAGAGAGTTTGGTTCAAAATGACTTTAACCTGTACATACAGCGGATTGGATGGCTTTCCCACACTGTAAAGATTTAAGAGACTGACTTTCTAGTTTGCTGGGTTTGTTTGTTTGGGGATTTTGTTTTGTTGTTTTGTTTCTTTATCTGAAGCCTCTTCTTAGACAAAATTGCTCCCTCCCAATCGCCCCAGAATTGTTCCTGGAGTAGGAGAATCACAGGTTCTCTGACTTCCAGCGCTTACACACTCTACACGTGCTTAGCCCGGAGATAGGAAAGGTTGCTTTTTATGGGCTTTTATGCTAAAAGCAGGGTCTTAATCATCCCTGGCCATATGTGCGGAAGCAGAACTCTTCCTCGTCTGTTGATAACTCCTTAAAGCACAAGTGTGTGAGGACAGGGTGGGTTTGAGGAATGCCTGTCCCGCAGTTAGACAGTCAATGAGATGGATGTCTTTGTGACTGTTCCTTAAGAATGAAGCGAAGGGATAAGGTATGAATTCTACCTCATCTACAGTCTATTAAGCAAACCCAAATGGCTTTTTGTTACTGTTATTGTTATTTTTATTTCCTGGGAGGAGACCTTTGGTTAGTGTAAGCAAAAGAAGTTTCTTAAAAACAAGCCGTGTCCCTACTGACTACAGTTTGTCAGTAGTTTACAGGGCAGGTTTCGTTTACAAATATAGTCTTAGATTTCCTCATGTCACCTTAAACAGTTCCTTTTCAGATGTTCTTAGCTCTGCAGAGCCCAATAGAGAGGAAAGCCAGACAATCTCTAAGGTCCTGATAGCGCAGTTCTAGTTTTCTGGTTTTCTGTATCCGGCGATTTTGTAGGGATAGAATGTTTAACACCAATGCTTCCTTCATTCAGAACTTAATTTTAATAAAGTCTCATTCATTTCACTTACGCTTTGCCCTCAAACTTTTCCTTTTTGAGTTTCCTGACAGACAAAGACATTCAAAGATTTATACCCAGTTGTCAGCAGTGACGATTTCACAGAAATCAATCTTGTTGTAGGGATGCCTCTGTTTAAAATTATTGGGTTTTTTCCCCTTAGATCACCATCCAGGAAAGTTGTAATTAAATATAAATAACATTACACTTGTCTACTCATCTTGAAATTACAAACTAGAAATTACATTATTAAGCCTTCAGGAGAGTCCGGGTGTAACAGGTTGCACACACTGTGGAAATAATGCCTGTGTTTATCACAACAATGCATATCTGCAGTAGGAGAACTCCGTTCACTGGCTGGAGTTCTCAATGCCATGAAGGTTTGAAGCATTTTCCTTATATCCTTTATGTCAGCCATTTAGTCTGGGGCTAAAAAAAGTCAGCAGTTCAGTCTCCGCTGACTCTGGGGCAGAAAGCCAGTCTATTAAGCAACCTGAATGACTCTTTCTGTTATTGTTATTCTATTTTTATTTCATGGGACCAGACATTTGACTAGGGTAAACGAATGACAATTCTTCAAAACAAGCTGTGTCCGTACTGACTGCAGTATGTCTATGATTTACATGGCATCGACATTGTATGTTTACGAACGTGTGTTTGGTGGGAGATCAGCTAATCCTACAAACCTGAAGAGAGACTCCCAGGAAAATCTTCACAGTTACCATACAACTAGCCCCAAGGACTGTATTATAGCCAGTACATGTGTCTGGTGGCCAACCATGACCTTTCATTTACTTACAACAAAAATGTCGACCTGCCTCCTTCTGCAGGTCGCTCTTGGTTAGGTAGTAGAAACCTTATAATCAAGCAGAGCTTGCATGGTTCCCACCCAGGGTTCACGGTCTAACTGGGGTTAATAGATATTAATTAATTATAATATAACAGTAGTCCTAATACGAGGCAAGCCTCAGTGTGAGCCTCAGATGGTGTGAAGTAATGAGTAAGGTCAAGGGACAGTTCCAGACACGAGACCCTTGAACCCAGATCTGAGAATGAATCTAAGTGAACTCTGGGGGAAGACAGGACCACACTGCCATGTCTTGTCACTGGGCCAGCAGCCAGATGGCTGCAATCATGGGCACTCAGGCAACAAGTCACCTGCTGGCTACCACCCTCTGAGTGGTACTAAGCTTCTGCCAGGGCTGCACCAGACTCAGGGGAAGGCACTGTAGCCCTTGTCTCCAAGGCTGTGAAGCCTGAGGACTTAGGAAGCCTTAGGTCCAGTGCTAGTGTGAAACTGTGAGCAGGGACCCAATACCAATGCAAGGTAGCAGGGCCTTCTGGGCTTGGACATTTGTTCATTGCTTGGACAGTTACCAGCTCTCCTGGGGACAGTCCGGTCCAGGAGCTTGGACCCAAATCTTTAGGGTCATCATACGTGATTGTCCCTGGGGCTGCAGCCCATTTCCACAGTGCATTGACACAGGCCAGCCCCTTTTGTAGGAATCTAGCCTCAGATGGTCAGGGTGAGTCCTTCCTCTTGAACAGTAAACAGAAGCCTTTGACAAAAGAGTAGTGAGCTTCGGGGACCCCTTTTTTCTGTGACTGCTGTTTCTCCCTGGAGGAAACTTGAGTGTTGGAGGTAGAAGACCTTGTTGTGATAAGGTTAAAAGAGCGGGTATGTATGTAATTCCAGCTTTGAGAGACCCAGTGCCCTCTCCTGGCCTCTATGGGCCACGGCCTCCTTGCCCATAGTGTGTGCATAAACATAATTCTGGGCAAAATATTCACACACAGAAAATTTTAAAATTTAGAAAAAAATGTATGTAATTTTTACCTAACTTATGTAATTGTTTACCTAACTCTAAATATTTCATGTTTTATACTGTGTATTGTCACAGACTTGTCATAATATAATTACATAAACTATAGAATTCTTAAGACTTTTATATTGTATGAAGTTCATTTCCTACAAGTACAGTTACTCTAATTTGGCTCCCTAAGATACTATTTACAATCTAGGTAAAAAGTGTTAGTTTTCTGTGTAAAGAGTAAAAACAAATTGAAAATATTTATATATAGCACCTTAATCTCTGAAGGCAGGAGGCAGATCTGAGAAGCTGGTAAAATAATTTATTTTTCTAGTGTAAAGGGTCGAAGCTGTGAATGTTTTCCGTGCTTAGTGATGTGCTTATAGAACTAATTTATAAATAAAAGTGTGAGATGGGAAAAAAAAAGAGTGGGTACTCATTCGGGATGTTAACGACTTCTTTAAGTTTTGAATAGTTTTCTATACTTACGGAAAAACGATCTCTGCATTTTAGACTCTTCCTGTGTATAAGAGTCTAAGTGAAAATGAAAATACTGAATTATCATATGTAATAAAAGGATTGGGAAATAGGGGAGTCTACGCTGACATGTACATTGAGTGTCCTATGAACTATGCCAAGGGATCCTTCCCCATCCTTCCATGAGCTAATGAATAAAATTGAAGTATTGATGGAAACTTTTATTTTTAAGATTAAAAAACGATTTGCTGGGTGGATCATTTTGAATATCAATGGCTCCATTTACTCAAACAAATACAATTAACTTTTACTTTCATTACCCCTCCTAGGAAGCCAAGGCAGTCAAAGCTTCCTGAAAAATATACAGCAGATTTTATTTTTCTGTGTGACTGTGCCCCAGGTGACTAGCATGTATGTGTCCTGAAACACGTTGTTATGGTTTTAAACGTAAATGGTGGACTTCCTCCTGGCTTTGTAGCACATGTTTAAACAGCTAAATTTAAACATACTCATTACTAAATTTTGACTTCTATGCCTCGATCAGTTCTGGGGTAAGGGCTGCCTTTGTAAATCCACCTGGTTACCATAAATCCTCATGTTCTACTCCCTGCACTAACCGCCATTCTTCCAGATCCGACTAAACGTTCATTTTCTTAACTTTCTAGAAACCCGCCTCTCAGCACTTTCCTCATCCATGGTTTTATGTTTCCAGCCTTTCTGTGATTATTTTTCCCTCTCTCTCTCTCTGTCCCTCCTCCTGAAGCCATGTCCCTGAACCTGAGGATTATGGGTGCTCGCCCGATGAATGGTAAGCTCCGTGGTACTTCCACTGATCTCTTTGAAAGCTTCTGATGTTTGCTTTGTAAACTGGCTTCCCCGGTCTCTCGGGAGCCCTTTTCACAGGTGTTGAGTGGGTATTAAACTCAGAGTATCCTTGGTTTTCTATCGAAACCCCTTGTAAACATAGTCTAAAGCTTTAAAGGTTGCTGGGGTCTTATATTACTTATCTATAGGGCTATTGGGATCAATTCCAGAGTGCCTAGGCAGGAAAAACTCCTTGACCGCTCAGTTGCCACCATTAAAACCTGTGGCTGTTTTAGCTCAGCACTGCCCCCTTCTGGCAATGTGAGGATACTGCTGCCATGGACCCGATAATGCTGGTCTGTGCCCAAGTGGAACAAATTTCCTTTCGTTACTTTAACTTTTTCATTACTTCTATGTCTCTTCAGAAGCTATAAAACGAAGACCTTTCGGTGTGTGCTAGAACTGCACTATCTACATTAGCAGTAAATGTGCTATAATTCATTTTAGATTTATTAAAGATAGCATATTATAAGTTTAATTTCAGTACTATGGGAAGCTTGGGGCTTTTTTGTTTTGTTTTACATTGAAATCCTTTCAGCCGTGTATTTGCATTTTTATCTAGGGAAATTTAGTGTAATCTATTATTCGTGTGATTTGTCATGATTTTGTGGCAAATAAAATTTGAAAAACGGTAATTTCTTTAGAGCTAGTGATTTTGAAAACAAGGCTCTTCTATTTATCTGGGCCTCAGGTAACTTGGCAATTAACTTACATTTCCAGTTTTCACTGCATTCCGGTTACACAATGAGTTTTCAACCTGCCTGGGGTTTACTGCCACCATGGGGAGATTTGATTAGAGATTTCAGAAAGCCTCCTAACACCCAGGATAATGGAGGCAGCCCTTTGACTCATGTGACCAGTACACCAACAGCGCCCATTACAAAGAGTGCCATCCATTCTGACACCTGACACAGCTACTCGGCCCTTCCGTGCAGTCTCCCCAAGAACACAGCCATCAGACAAGCATTTCATCTTGGCTTGACTTAGCCTTGCCTGCATTCCTTCTCATCTGGTCCCGTGAGTCTGTAGTCAAAGCTTTCACTGCAGATGCCCTTTGACCTGAAGTCAGGTGCGGTCTGAATAAACCCAGCCTGCCTTTTTTTTTTTAGCACCTATGTGTCTTTTTATATGCTGCTTGTCTATGGGACCGTTTTACCCATTTTAACACCTATAGAGTTGAGACACACATCTCTCTAAGAGACATGATTCCCTTTCCTTAGCCTTGCTGTTTTTCTCCGAAGTGTCCCATTATTTTTACCCAGGTCCTTTAAAGCATTAGACTCTGCGCATAGGTTGCTTCATGTCCATAACCACTGTGGGAAGGAGGGGAAGTCATTTATCTTGCTCATACGTTTTTTTTTTTTTTCCAGAAAGTATCTTTTTGGGAAAAGTCTAAGTTCAAATGAAATAGACCAGCTTTTTCATGAATTGTGTATTTTCACTTTGCCTTTGAGTCTTAAAGTATACCAGGAAAGACAGTTGTCGCTTTTATGAGAAAGGTATTTGTTTATGTACTTGGGTTCTCTGTCTATCGCTGTGCATTTGCAAAGGCGAAGTTATACAGGGTTTCTGAGGTTCTGTGTAGGGTTCTGTGGACTGGCCATGCATGTGAGCTTTGGATTCTGACCATTAATGTTCCGATCCTGACCTGTCCTTCACATAAGTCACTAACTGCCTGAGTGGACTCAGTGGAAGACTGTGGCCACCAATAGTCCTTAAATCGGTAGGAAATTTTGATGATTAACCAAGCCCTAGCCAGAAAGCTGTTACTGGTGGCTGTCGGTCTGCATCATATATCTGACATGGTCATTTTCAAGTTCGTAGATTTTTATAGAGAGTAGCCTGTCTCCCCAAGAACATAGCCAGCAGACATGGGAGAGAGCCAGAGAGAGCCCTGGCTCAGGCTGATTATGAAAGGTGTGTGAGCGCCATCGCACGTCTGTAGACTTGAGGACTTGTGCTTCTTTTGGAGCATGGATAGCTTTGCGTTTCAAGCACTTCTCGATTCACCTATATAATATTTTCCTAACTGGTTTTATTTCAGTTAAATTGCTAAGATTGTTAAGGAGGGGCAAATAAAACATCTACCATTTGTCTGAGTTGAGGTACCGTAGCTTGGAAGCTCATAACGTGACTCCATACTATCAAAGGCCTGGCCTTTGCCTGGACTCATCTAACTGGTTTTATGTTGCTGAGGAAACCAAGATCAACCGTGGCCTTGGTGGAGCCCTGTGCTCTGTGTGTCTGACAGTGTCTCTATGTTGCTGCTCCAGGAGGAAAGAGTATGGAAGACTCTATAACTGAAACTGTGGAAGTCATCTCCTCAGTGGCTACTTGGTAGCTTTGTCTGGCAATGTGAAGTTGACCGAACACCATGTAGCAAGCTTATAGCAGTCTGTCTAATTGTCCTGCTTGAAATGACACACACTACAAAAATATCAAGAAAACCCACATGTGTGGATGATATATTTATATTTGGTCCATTCTGAAGATCCTTTCAAATATACCCTTGCCATTAAAGAGCATGCAATAGCTGAGATTCTCTAAAATGTATTAATATAAAGGATTTGCATAGATTATGACTTCCCAGTGCATAGCTTCTAACTCCGAAATTGGCATCGTTTTCCTCTTGTTGCCAAAAACCATCAACTAACGCGGAGCCTTGGAGACTAAGTCCTGTCTATTAAAAACATTATCTAAGTTGATAGTATCGGTATTGAAAGGACTAGAGAGAAAACACCCATGTAATTATAAGGTTCATGTGATTACTCTAAAAAAAAAGCACATATATTCGTAACCACTTTTCTCTTAAAAACAAAACATATTTTGGAATGTTGGAATGTTGAAATAATAACACAGCAAATGTCCCACCGGTTATGTTAACAGGTTGTGCTCTGGGCCAACTTCTCCTGTGCCTTTCTACCCCAATTATTCTGAAGCAAATCTAAGTGAATAATTCTTTTTAACTACCTGATATGGTCATGTGTTATATTCTCATTGTTTTTCAAGTAAATGACAGTGAGCTGATTCTCCCAAGGGATGCCTTAGAGCCCGCCCTGCAGTCATTTAATGTTTTTTGTTTGTTTGTTTGTTGTTTGTTTGTTTGTTGTACAGTTATAGTATCTGCAGGTTGAACTAGTTTCTCTTTTCTGCTTGGTTATTTTCTCATTTCACCTACCTTATAATTCTGTGTGGAGCGAGTGGCATTTGTTTGTTCTGCTGTAGAAGGTAGGCTGGCTGAAGCATTCTTCCAGACGTGCCCTTATAATAATGAGACGTAACCCATCTGTGTTAGCGTCAGTCTTCAAAGCCTCCCCTCGGCGGGCTCTTATTCAGGAGTGCAGACTTTCACACAGTATTTTAGAACTCCTCTTTTGTAATTGCCTTCAGAAATACTTGAAGTCACCCAGGAAACTGAGTCTCATTACTTTGATCCAAACCAACCATTATCTAGCCAAAACAGAGCGTTTAGTCACCCATTCAAATTCTTGGACTTTAACTACTCTGAGTAACAAACTCATGACTAAAAATTAAACCTACCAGCAAGCAATTTGGACTCCAAATGAACAGGACCTTTATAAACCTGGAGGTGCAGATTCTTTTAAAAAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAAAAAAACAGTACTCTGACTACTGGGGCCAGAAAGCCCTGCTGCCGAAGCAGGTCCCCTGGGTTAGGGAAAGGGTCAGCCCCTGAGTCAAGGAGAATACTGACCAAACAGGCTTTATACTACCCTGCCCATTGCCTCAGAAAACTGTCTCCTGCTGCCAAAGGCACTCCACCTCAGGTTGTCTGGGAGATGTGGCCTGGATCAAGAAACCAACCTCTCCATGCTAGCCGTAGGGCAGGCTGTGAGTTTGCAGGCTGTGAGTTTGCAGGCTGACGCATTGTGTGAGTGCTATCCAGACTGTTGTACAACATCTCAGGGGTGCATGTGTCAGAGGCTCAGGTTCACCCGGCCTCCAAACCAGAAGAGACTCCAAGACAGATAAACATGTTGTTTTAATCCACACGAGTCATAGAAGTATGAACGAGAGAAGCACACACCTTTCTCCTGGGACTGAGGTTTTCTCATTTTAAAGCTGAGTCATTTGATATAGAAAGATGAGTTCTCCCAGAGCTGGGACTCTGTGTCTCTGTGATAATTGCCACCAGGTAATTATTATTGTAGCTTTAGAATATGTCCTCAGCTGAAGGATTTTCTGTCCCCAGCAGTCAGATCACTGCTCTTTAAAAGCCAAGAGTCCATCCAGATCTCAGGTTAGGGATAACGATTAGCAGTGTTTCCGTGTTTCTGTCCAGTTTTGCCTGACAGCATCACCTGTACCAGCAGTAAATCCCACTGTGACTGGAGAGCTCTTGCCCTGTGGTCCCCATGGGTTTCTTTCCTTGGGACAACTTAAAGGGAAAGATGCCAGACGTCTCCTTTCAAAGTCTGTTCCATTTGGAAAGGTTTATGAACCCGAGAAAGCTGGGCTAGAGCAGAGGCGTGAAGGGAGGGCCTGCCACCTAGTGGTGCAGGATCCAAATCACACTCCGGACTCTAAGCGAGCCACTTTGTGAAAAATGCCAGTAGGAAATTGAGGGATGGAAAGAAAGAAGTGCACAGAGCCAGAGAGTGAATGAGAATGCATGTGTAGAGGCTGCCCAAGGGCAGGGGGCATGAGCTTCCCATCGAGGCCCACTCCTTACTGCTTAGGAGGAGAAACTGTGGAGCTCGAGGCCCGAGGTCACATTATAGCATCCCCTGCAGGGCGGTTCCCTGCTTGTGAGAACCAACCACCCAAGGGCTACATCAATCTTGGATTCAGACTTTACCCCATCCCCAAAGCTATGCACTAAGCAAAACCTAATTCTAGAATATAAGAAGAAAACTCATCTCTCCAGGGACCTGAGACAGGAACATATGTGGTCATGGGAGAATCAAGAACATATGTGGTCATGGGAGAATGACTGGACTATAGTCAACAAGGAATAGCAGGAACTGGAGGTTGAGCGAGGTCCAGGAGTGACCAGCTAGCCACAGGCCTGTTCCTAGAGAGGCAGGAATCTGGAAGACAGTCTGCCTTACAGAGGAACCTGCTGTACAACTTTTCCTGGGGAAGGATGACTAGACCAGTGCTCTCAATGTTTGCAACGCTGCAACCCTTTATACGGCTCCTCACGTTGCAGTGCCCCCCCCCAACAATAAAATTATCTTTGTTGATAATTCATAACTGTCATTTTCCCACTGTCATAGTCACAGTGTAAATATCTGATGTTCAGGATATCCGATATGTACCCCCCCGTACCTCCCATGAAAGGGCTGTCGGCCCTCTAAAGGGGTCACAACCCCATGAATAACTAGTGCACTAGACTGTGTTGAGTTTGTAACTGTGAAGCCTGCCGTCCTGGCTGAGGCCTGACTCATAAAAGCATAACTTTCCTATTTCTTCTTCTCCTCTCCCTATTTGTGTATAGACTTGCCAAAGCATGTGCAGGGCACGCTTTCTTGGGTTCTCTGGTCTTTTTCATCCTTCTCATTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTCATCATTTTGTTTGTTTTCTTGTTTTTTGGCTGTTCTGGAACTCACATGGAGACCAGGCTAGCCTCCAACTCAGAGATCGGGCTGCCTCTGCCTCCCCTGGCCTCTTACTCTTTCCTAAGCTGCAGCTTGCTGCCCCCAGCCTGCTTCTTCATTGCCGCTGCAGAACATGTGGCTTGCTCCCTCCCACCCTTTCCATATTATCCTTCCAGGAAGCTAGAGAGATCTACAGTTTGCTGCCCAGCCTTTTAGATGCTAGTAAAAGTTTCCTCGAGGTTTCTTGTGAGCCTCAAGGTTTCCTCAATTCTTTTATTGATGAGGCTAAAAACCCAGAGGAAAGACCCGATTTTTCCCTGTGACAATATTTGGACATTGGGATGTACTGTGGAAAAAATGTTTTATACATGGCAACATTTTGTACCAAGTAAATCATTATTTTCTAGAACAAATGTTACTGAATCAAAGGATTTTAGTTTCTTACCCATTACTTTTCTTAGGTTGGTCTAAACTTAACAATCCTCCTGCCTCAACCTCCCCAGAGCACAGATTCCACCACACCCTATCTCTGGTTGCTTTTTAAAAACTGGATGAATCAATTTCCACTTCACCAGGACACACACTTCACTCTTCTTCCACAACTCGAACAGCACAGAGCTGACAAGTTTTTTGTCAAATTGATGTCCGTCTTTCCTTTGTCTTGTGATGAAGCTAGAGTGAATATCTGGTCAGAGATGGCTGCCGTTTCCTTCTCTGTGCGTTGTGAGTTTGGGCTTCTTGCCTGGCGCTCTGTTGTCATGCTGACCTTGTCCTTTTGTGTCCATGGATCTTCTTGTTTGGTAGGAATTAGTTCCGTCATATAAATTCGATTTCCCCTCAACTTGCCCTGTGACCTTTGATTTCCCTTCAGTGGAGTTTGCTCTGCAGAAATAATTGTTGTTACACAGTCAGCTCTGTTAGTGTCTGTGTGTTCTGTTTTGGGACTTAGACAGGACACCTAGGCCTTTCCCATGAGTGCTTCTTAGCAAACTGTTTGCAGGAGATTGAGGTGGAAGCGATGGGTTGGCCTTATTCTGTTGTCTTTTTTATTTTCTAATTGTCCTAGTTGGAGTTGAAGTTTGGAATTAAAAAAAAAAAAAAACCTGTAGTCAAGTGAGGTTGTAGCTCATTGGTTATATACTAGCCTAGTGGATATGAATGGATAGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGGATGTTTGGGTGGGTGGATAGGTGGATTGATGGATGGACGGATGGATGATGGGTGGATAGATGGATGTTTGGGTGGATGGATGTTTGGGTGGATGGATGGGTGGGTAGATGGATGGATGATGTATGGATGGATGGAAGGATGTTTGGGTAGATGGATGGATGATGTATGGATGGATGGATATCTAAGTTCTGATTGAAAGATAGGTATTATTGATTGGGCTGGGCATTTTCTGAGTTCTCTTTTTTTATTACCTGAGTTTCTTATATGCATTTGAGTGTTCTTCCCTTTCTGGTATCGAGCAAACATACCCCTCCCCCCTCCCCTTCTTATGGGGTCCCTTCCAACCCTCCCCCCCATTGCCGCCTCCCCCACCCCCAGTCTAGTTACTGGGGGTCAGCTTAGCAAGACCCAGGGCTTCCGCCTTCACTGGTGCTCTTACTAGGAATATTCATTGCTTACCATGAGTGTCAGGTCCAGGGTCAGTCCCTATATAGTCTTGGGTAGTGGCTTAGTCCCTGGAAGGCTCTGGTTGCTTGGCATTGTGTCATATGGGGTCTCGGAGCCCCTTGCAAGCTCTTTCAGTTCTTTCTTGATTCCTTCAACGGGGTTCCTATTCCGTCAGTGGTTTACTGCTGGCATTCGTCTGTATTTGCGTATTCTGGCTGTGTTCTGCAGGAGCGATCTAGATCGGGCTTCTGCGGTCTGACTTCTTTGTCATCCATCTTGTCTAATTGGGGGCTGTATATGTATGGGCCACATGTGGGGCAGGTACATCCTGAAGGGGTGTTCCTTCCGAGTCTCTGTTTTAATTTTTGCTCCTCTTCCCGTCAAGCGTATTCGTGTTCCCCTTTATAGAAGGAGTGCAAAGCATTACTTTGATCATCATCTTGAGTTCATTTGTTCTAGCATCTAGAGGTAATTCAAGCATTTGGAGTAATACCACTTATCAATGAGTGATACCTGTATGTTTTCTGGATGGGTTAGCTATCAGATGAATTTTTCCATTCAACATTGCTACGATATTTCATAAATTCGTTGTTTGATAGCTAGTAATATTCCATTGCGTGTAGATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTGAGTTTTCTCTTAATGGCTGTGTTGACTCTCCATTTTTGTATAATTGGGAAATAATTTCTTACAATTCTGTATGGCTTTAAGCTGCACATGATGCAGAGAGCTAGGCCTGCTTTTCCCTCTCAATCTTAGCCGCTCCATGCCCTGCTCGCCGCTTATTGCAGGGCGCCACGTCTTTGCCTTTTCATGAGCAGACTGCTACTTGAAATTTTCTGAGGAAAGAAAAGAACACGATGTGACAAGTAGTGCTGGTTCCCATTTTATATGCAGGCAATATGTAAATGTTATGGTGTTAAATATTTATACTTTTAGCATATAGTCCCTATTTCTAAATATTGGGAGCTTCCTATAGTTTTTGCTTGTTTTTTCCTGTACTTAGTAGATATTTTGTAAGAGTAGGGAGCATGGTGACAGCTCTGTGCCTGGATCATCCTAGCCAAGCTACTGTGTTGGAGGACGAGGTGTCCGTGGTTTGCCATGGTCTTGGTAAGGAAGCCACTCCGTAAAAGGAAGCTGTTATTTAAGATTTTACACAGTAGAAGCCTTCCTTAGGGAACAGAATGGGATCTATCTGTGTAAGTATTTCAGTTGTATATCTAAAGTTATTTAAGTACTTTTGAAAGTTGGATCAGTAATAGCAACCGAATTTATGAAGTGAATGAATTCATGGTAAGAGTAATGAGACATATTCTAACACTTACAAAGGCATTTATTTTGGAACTTTTTTTTAAAGATTTATTTATTCATTATATATAAGTACACTGTAGCTGTTCAGACACACCAAAAGAGGGCATCAGATCTCATTACAGATGGTTATGAGCCACCCTGTGGTTGCTGGGAATTGAACTCGGAACCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCTATTTTGGAACTTTTTGAAAGAAAAAGTAGCTAGATATTCCCTCATGTCTCAACCTCCCCAACAAATAAAAATGAAGCTATGAAACAAGAGGGAATATAACAATGGGAATATTTCATAGAAGCACAAGTAATAACCTTTTACATTTGTTTTCTTTCTATTAACCGTACCCATTTTTTTCATTAGTTTATTTATTCACTTTATATTCCAATCACATCCTCCATTCCTCCTCTGTTCCCAGTCTCACCCTCACAGGCCCCTCCCCAGCTACCCCTTCCCCTTCTGCTCAGAGAAAGGGAAGCCCCCCACCCCCGCCATGGTTACCAATCTACCTGGCACATCAAGTCACACATGCTCTCCCACTGAGGCCATACAAGGCAACCCAGCTAGCAGAAGGGGATCCAAAGGCAGGCAACAGAGTCAAAGACAGCCCCGCTCCAGTTGTTATTATTAGGGGACATGAAGACCACACAAATGTGCAGGGAGCCCGAGGACCAGCCCAGGCATGTTCCTTGGTTGGTGGTTCAGTCTCAGTGAGCCCCAGTGGGCCCAGGTTAGTTGACGCTGTAGGCCTTCTTGTGGGGTCCTAGACCCTTCAGATCCCTCAATCCTTCCCCCACTCTTCCACCACACTCCCTGCGCTCCACCTGATGTTTGTGGGTCTCTGCATCTTTTTCCATCTGCTGCTGGATGAAGCCTAGGTTCCTCTCTGCCACCATAGCAGAGCATCACGATAGTGTCAGGGATTGGCTCTCTCTCATGGGATGGATCTCAAGTTCAGCCAGCCATTGGTTCATTGTTCCCTCAGTCACTGCTCCATCGTTATCCCTGCACCTCCTGTAGGCAGGACAAATTTGAGGTCAAAGGTTTGGGGGGGGGTTGGTGCCCCCCTTCCCCTGGGATTTCCACCTGGCTGTAGGAGGTGGCCACTTCAGTCTCCATATCCCCAGCTGCTAGGAGTCGCAGCTGGAGTCAGCCCATAGACTCCCAGGAGCCTCCCGCATCCCAGGTCTCTGGATCATCCCAGAGATCACACACACGTACCTATTTTTTGTTCTCTCTCCCAGCCCTTTCTCCCCACCCCAGTCCTCCCCACCTCTGATTCCCTACCTCATTCCCCCTCCCCAACCCTTCTTCCACCCAGTTCCCTCCATCCATTCACCAAATTTATTTTATTTACATCTATTTATTCTCTGGAAAGGGATGTGCCATGGTGTAGGTATGGAGGTCAAAGGACAGACTGTAGAATCAGTTCTTGCCTTCTAGCCTAGAGTCCCAGGAACCAAACTTAGGCCATCAGGTTTGAAATCAAGAGCCTCTCCCCACTGAGCCATCTCATCAGTCCCAAAAGTGAAACTGTTCTTTATAAATGATGATATTTTTAAGAGAATTGTGTTGATTTTTTTATCTACCCACTGATAAGTCATTTAGAAGTTACTAGATTCCCATACTTAATACTGAACCAATAGGACCAATGATGATTTTGAGAATCCTTAACTACACCTGCTAGCAGATATCTTCTATAATCTTGCTAATTAGCAGGCCAAACATTGGTATTTAAATAGAGGAAGCTGTGTAGTGGAAGCTGTGTAGTATTACAGGCACACATCAATTTTACCTCGTCAGTTGAGGGAAGGATACTGGTTACTTTCTCTGCTGCTTTCTTCTATGATCTCTTTTCCAGGCTTGTGGTTTTAAAATGTGAAGGGAAGCCTTGAAACTTGGCCTATTAACATTGTCAAAACTCTGTAACCCAAAATTAAATTATGATTAAAACCTTCTAAACTGTAATTACTTATTTCTTAGAAAGGTTATTTTTTTCCTCAGTAAATTCTAAAATCTCTGTACAGTTAAAAAATATATTTTGAAGTATTTTGACATGCCTACTTAAATGCTCCTTGGTTTTTGGTTTGATTTTTTAAGGCGTGGTCATGAGATTAACAATAGATAGATTAGAAAATTAATATAGATTCTATTTGTTTCAAGCAAAGTCCATAATTCATCTGTTAATGTAAAGACCCAGCCACAATACAAATCCCATACAGGTTCATGGTTATTTTCCTTTCTGTATAGGATAATAGGATATACTCCAAAGTGATTTTTTACATATATTTATAATTGATGACAAACTATGTAATTAATTAGTTTAACATTCACATTTTTGCAATTTAGATCATTTGTATTTGTCGATACACACGAAGAGTTTCTATATGGCCAAAGTAAAACACAATTTTAATAACTTTGCTACTATTTAGACTATTTTTCACACACGCTTTATGACAGTCCTGAAATCAGTTATTTGAATGTCTTGAGAGTCATCACTCATCACTAGAAGTAGGTGAGGAGACCAACATAAGTGAACTCACTGCTTTATTTTCCCCCTTTAG
Seq C2 exon
GCAGAGCTCACAGTTTGGAGATGAGAAAACCTTTAATGATCCGTCGTTGCTGGAAAATCTTCAGAATAACCAT
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000034200:ENSRNOT00000044017:9
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.144
Domain overlap (PFAM):
C1:
PF127102=HAD=PU(6.7=86.7)
A:
NA
C2:
PF127102=HAD=FE(6.2=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]