Special

ENSBTAG00000004908 @ bosTau6

Biotype
protein_coding
Gene Symbol
CHRNE
Description
Bos taurus cholinergic receptor, nicotinic, epsilon (muscle) (CHRNE), mRNA. [Source:RefSeq mRNA;Acc:NM_174272]
Coordinates
chr19:27118517-27123114:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
93
chr19:27119512-27119604
+
87.26
34.3
0
Alternative 3'ss
100
chr19:27119505-27119604
+
11.43
29.76
0
Exon Skipping
156
chr19:27119512-27119667
+
94.98
12.32
0
Exon Skipping
107
chr19:27122618-27122724
+
77.77
79.44
0
Intron Retention
84
chr19:27122534-27122617
+
17.87
35.36
0
Intron Retention
117
chr19:27122725-27122841
+
15.38
31.91
0
Intron Retention
142
chr19:27119370-27119511
+
44.07
91.76
0
Intron Retention
378
chr19:27120068-27120445
+
10.35
33.33
0
Intron Retention
77
chr19:27120647-27120723
+
57.98
86.03
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000108556 CHRNE 1-to-1
Human hg19 ENSG00000108556 CHRNE 1-to-1
Mouse mm10 ENSMUSG00000014609 Chrne 1-to-1
Mouse mm9 ENSMUSG00000014609 Chrne 1-to-1
Rat rn6 ENSRNOG00000003777 Chrne 1-to-1
Chicken galGal3 ENSGALG00000007899 F1NJ26_CHICK 2-to-1
Zebrafish danRer10 ENSDARG00000034307 chrne 1-to-1
Fruitfly dm6 FBgn0000038 nAChRbeta1 4-to-1