Special

ENSMUSG00000014609 @ mm9

Biotype
protein_coding
Gene Symbol
Chrne
Description
cholinergic receptor, nicotinic, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:87894]
Coordinates
chr11:70428385-70432718:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
62.72
22.18
0
Alternative 3'ss
3
chr11:70428817-70428819
-
37.28
22.18
0
Exon Skipping
107
chr11:70428710-70428816
-
64.08
62.44
0
Exon Skipping
115
chr11:70430457-70430571
-
74.9
100
0
Exon Skipping
156
chr11:70431657-70431812
-
71.62
100
0
Intron Retention
234
chr11:70432398-70432631
-
21.01
100
0
Intron Retention
85
chr11:70428817-70428901
-
13.1
100
0
Intron Retention
79
chr11:70428631-70428709
-
15.3
84.67
0
Intron Retention
105
chr11:70432022-70432126
-
13.41
90.14
0
Intron Retention
99
chr11:70431813-70431911
-
38.36
100
0
Intron Retention
449
chr11:70431208-70431656
-
21.12
100
0
Intron Retention
257
chr11:70430850-70431106
-
25.76
96.15
0
Intron Retention
77
chr11:70430572-70430648
-
36.19
97.3
0
Intron Retention
1179
chr11:70429278-70430456
-
17.68
42.86
0
Intron Retention
74
chr11:70429089-70429162
-
47.38
94.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000108556 CHRNE 1-to-1
Human hg19 ENSG00000108556 CHRNE 1-to-1
Rat rn6 ENSRNOG00000003777 Chrne 1-to-1
Cow bosTau6 ENSBTAG00000004908 CHRNE 1-to-1
Chicken galGal4 ENSGALG00000007899 CHRND 2-to-1
Chicken galGal3 ENSGALG00000007899 F1NJ26_CHICK 2-to-1
Zebrafish danRer10 ENSDARG00000034307 chrne 1-to-1
Fruitfly dm6 FBgn0000038 nAChRbeta1 4-to-1