Special

ENSMUSG00000014609 @ mm10

Biotype
protein_coding
Gene Symbol
Chrne
Description
cholinergic receptor, nicotinic, epsilon polypeptide [Source:MGI Symbol;Acc:MGI:87894]
Coordinates
chr11:70614883-70619216:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
74.26
25.28
0
Alternative 3'ss
3
chr11:70615315-70615317
-
25.74
25.28
0
Exon Skipping
107
chr11:70615208-70615314
-
57.29
88.04
0
Exon Skipping
115
chr11:70616955-70617069
-
70.83
90.38
0
Exon Skipping
156
chr11:70618155-70618310
-
72.46
100
0
Exon Skipping
187
chr11:70615400-70615586
-
93.09
68.75
0
Intron Retention
234
chr11:70618896-70619129
-
26.27
100
0
Intron Retention
85
chr11:70615315-70615399
-
18.19
100
0
Intron Retention
79
chr11:70615129-70615207
-
20.76
84.67
0
Intron Retention
105
chr11:70618520-70618624
-
17.65
90.14
0
Intron Retention
99
chr11:70618311-70618409
-
43.16
100
0
Intron Retention
449
chr11:70617706-70618154
-
42.44
100
0
Intron Retention
257
chr11:70617348-70617604
-
32.09
96.15
0
Intron Retention
77
chr11:70617070-70617146
-
48.12
100
0
Intron Retention
1179
chr11:70615776-70616954
-
19.14
42.86
0
Intron Retention
74
chr11:70615587-70615660
-
52.67
71.07
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000108556 CHRNE 1-to-1
Human hg19 ENSG00000108556 CHRNE 1-to-1
Rat rn6 ENSRNOG00000003777 Chrne 1-to-1
Cow bosTau6 ENSBTAG00000004908 CHRNE 1-to-1
Chicken galGal3 ENSGALG00000007899 F1NJ26_CHICK 2-to-1
Zebrafish danRer10 ENSDARG00000034307 chrne 1-to-1
Fruitfly dm6 FBgn0000038 nAChRbeta1 4-to-1