Special

ENSBTAG00000020056 @ bosTau6

Biotype
protein_coding
Gene Symbol
COL12A1
Description
collagen, type XII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2188]
Coordinates
chr9:14869511-14983763:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
96
chr9:14912578-14912673
-
1.44
36.17
0
Exon Skipping
117
chr9:14976552-14976668
-
36.55
98.04
0
Exon Skipping
273
chr9:14961427-14961699
-
58.14
98.07
0
Exon Skipping
273
chr9:14959084-14959356
-
59.63
93.44
0
Exon Skipping
273
chr9:14949682-14949954
-
63.52
92.24
0
Exon Skipping
267
chr9:14943455-14943721
-
59.69
96.95
0
Exon Skipping
193
chr9:14942814-14943006
-
59.09
98.3
0
Exon Skipping
122
chr9:14941387-14941508
-
59.59
100
0
Exon Skipping
144
chr9:14974629-14974772
-
44.36
97.58
0
Exon Skipping
60
chr9:14974144-14974203
-
47.37
98.34
0
Exon Skipping
264
chr9:14971598-14971861
-
51.74
100
0
Exon Skipping
165
chr9:14971243-14971407
-
57.38
100
0
Exon Skipping
174
chr9:14969764-14969937
-
58.34
100
0
Exon Skipping
291
chr9:14967341-14967631
-
54.65
100
0
Exon Skipping
603
chr9:14966299-14966901
-
54.82
98.34
0
Exon Skipping
273
chr9:14964919-14965191
-
53.82
98.34
0
Intron Retention
209
chr9:14925644-14925852
-
3.45
61.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000111799 COL12A1 1-to-1
Human hg19 ENSG00000111799 COL12A1 1-to-1
Mouse mm10 ENSMUSG00000032332 Col12a1 1-to-1
Mouse mm9 ENSMUSG00000032332 Col12a1 1-to-1
Rat rn6 ENSRNOG00000058470 Col12a1 1-to-1
Chicken galGal4 ENSGALG00000015908 COL12A1 1-to-1
Zebrafish danRer10 ENSDARG00000019601 col12a1b 1-to-1
Fruitfly dm6 FBgn0035798 frac 9-to-1