Special

ENSGALG00000015908 @ galGal4

Biotype
protein_coding
Gene Symbol
COL12A1
Description
collagen alpha-1(XII) chain precursor [Source:RefSeq peptide;Acc:NP_990352]
Coordinates
chr3:80212182-80312375:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
270
chr3:80244594-80244863
+
77.38
80.84
0
Exon Skipping
267
chr3:80246741-80247007
+
77.7
79.16
0
Exon Skipping
140
chr3:80266816-80266955
+
98.55
42.31
0
Exon Skipping
120
chr3:80272502-80272621
+
99.39
28.23
0
Exon Skipping
94
chr3:80290856-80290949
+
1.35
36.07
0
Exon Skipping
32
chr3:80294775-80294806
+
1.29
37.21
0
Exon Skipping
174
chr3:80227726-80227899
+
65.22
100
0
Exon Skipping
55
chr3:80215039-80215093
+
18.64
92.04
0
Exon Skipping
273
chr3:80231282-80231554
+
68.89
97.51
0
Exon Skipping
273
chr3:80232897-80233169
+
68.19
90.47
0
Exon Skipping
273
chr3:80234128-80234400
+
72.9
88.37
0
Exon Skipping
193
chr3:80249251-80249443
+
73.87
95
0
Exon Skipping
122
chr3:80250136-80250257
+
71.44
100
0
Exon Skipping
117
chr3:80222977-80223093
+
55.51
100
0
Exon Skipping
144
chr3:80224297-80224440
+
61.52
100
0
Exon Skipping
57
chr3:80225992-80226048
+
67.32
90.47
0
Exon Skipping
264
chr3:80226749-80227012
+
70.72
90.47
0
Exon Skipping
165
chr3:80227124-80227288
+
69.37
100
0
Exon Skipping
291
chr3:80228729-80229019
+
67.73
95.14
0
Exon Skipping
603
chr3:80229237-80229839
+
71.57
92.88
0
Intron Retention
2700
chr3:80250258-80252957
+
9.85
33.69
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000111799 COL12A1 1-to-1
Human hg19 ENSG00000111799 COL12A1 1-to-1
Mouse mm10 ENSMUSG00000032332 Col12a1 1-to-1
Mouse mm9 ENSMUSG00000032332 Col12a1 1-to-1
Rat rn6 ENSRNOG00000058470 Col12a1 1-to-1
Cow bosTau6 ENSBTAG00000020056 COL12A1 1-to-1
Zebrafish danRer10 ENSDARG00000019601 col12a1b 1-to-2
Zebrafish danRer10 ENSDARG00000078322 col12a1a 1-to-2
Fruitfly dm6 FBgn0035798 frac 9-to-1