Special

ENSMUSG00000032332 @ mm10

Biotype
protein_coding
Gene Symbol
Col12a1
Description
collagen, type XII, alpha 1 [Source:MGI Symbol;Acc:MGI:88448]
Coordinates
chr9:79598991-79718831:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
145
chr9:79601035-79601179
-
56.82
73.51
0
Exon Skipping
117
chr9:79707816-79707932
-
68.04
100
0
Exon Skipping
273
chr9:79697401-79697673
-
60.61
100
0
Exon Skipping
122
chr9:79680293-79680414
-
75.71
89.6
0
Intron Retention
7431
chr9:79707933-79715363
-
4.31
74.05
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000111799 COL12A1 1-to-1
Human hg19 ENSG00000111799 COL12A1 1-to-1
Rat rn6 ENSRNOG00000058470 Col12a1 1-to-1
Cow bosTau6 ENSBTAG00000020056 COL12A1 1-to-1
Chicken galGal4 ENSGALG00000015908 COL12A1 1-to-1
Chicken galGal3 ENSGALG00000015908 COL12A1 1-to-1
Zebrafish danRer10 ENSDARG00000019601 col12a1b 1-to-2
Zebrafish danRer10 ENSDARG00000078322 col12a1a 1-to-2
Fruitfly dm6 FBgn0035798 frac 11-to-1