Special

ENSG00000080345 @ hg19

Biotype
protein_coding
Gene Symbol
RIF1
Description
RAP1 interacting factor homolog (yeast) [Source:HGNC Symbol;Acc:23207]
Coordinates
chr2:152266397-152364527:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
20
chr2:152324804-152324823
+
1.16
25.3
0
Exon Skipping
98
chr2:152351743-152351840
+
27.66
42.64
0
Exon Skipping
152
chr2:152359548-152359699
+
75.47
39.31
0
Exon Skipping
114
chr2:152266928-152267041
+
95.98
31.72
0
Exon Skipping
93
chr2:152279464-152279556
+
90.19
72.39
0
Exon Skipping
78
chr2:152324988-152325065
+
66.37
68.67
0
Exon Skipping
54
chr2:152325568-152325621
+
3.56
34.48
0
Exon Skipping
55
chr2:152319398-152319452
+
83.35
37.16
0
Exon Skipping
267
chr2:152322368-152322634
+
97.21
26.38
0
Exon Skipping
181
chr2:152300043-152300223
+
98.71
40.66
0
Exon Skipping
130
chr2:152336612-152336741
+
1.55
30.17
0
Intron Retention
1332
chr2:152293866-152295197
+
6.87
74.12
0
Intron Retention
494
chr2:152324661-152325154
+
23.5
65.73
0
Intron Retention
2570
chr2:152276894-152279463
+
7.59
53.21
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000036202 Rif1 1-to-1
Mouse mm9 ENSMUSG00000036202 Rif1 1-to-1
Rat rn6 ENSRNOG00000054901 Rif1 1-to-1
Cow bosTau6 ENSBTAG00000021020 RIF1 1-to-1
Chicken galGal4 ENSGALG00000012484 RIF1 1-to-1
Chicken galGal3 ENSGALG00000012484 RIF1 1-to-1
Zebrafish danRer10 ENSDARG00000062650 rif1 1-to-1
Fruitfly dm6 FBgn0050085 Rif1 1-to-1