Special

ENSMUSG00000036202 @ mm9

Biotype
protein_coding
Gene Symbol
Rif1
Description
Rap1 interacting factor 1 homolog (yeast) [Source:MGI Symbol;Acc:MGI:1098622]
Coordinates
chr2:51928357-51977903:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
23.01
41.65
0
Alternative 5'ss
24
chr2:51949086-51949109
+
76.99
41.65
0
Exon Skipping
116
chr2:51945093-51945208
+
77.23
28.56
0
Exon Skipping
265
chr2:51958953-51959217
+
99.08
28.23
0
Exon Skipping
78
chr2:51972188-51972265
+
61.48
86.06
0
Exon Skipping
79
chr2:51929767-51929845
+
90.07
66.29
0
Exon Skipping
89
chr2:51930750-51930838
+
6.44
23.81
1
Intron Retention
270
chr2:51928387-51928656
+
72.26
96.04
0
Intron Retention
1122
chr2:51947901-51949022
+
7.47
32.69
0
Intron Retention
999
chr2:51949110-51950108
+
8.04
25.34
0
Intron Retention
1755
chr2:51929846-51931600
+
11.12
48.64
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000080345 RIF1 1-to-1
Human hg19 ENSG00000080345 RIF1 1-to-1
Rat rn6 ENSRNOG00000054901 Rif1 1-to-1
Cow bosTau6 ENSBTAG00000021020 RIF1 1-to-1
Chicken galGal4 ENSGALG00000012484 RIF1 1-to-1
Chicken galGal3 ENSGALG00000012484 RIF1 1-to-1
Zebrafish danRer10 ENSDARG00000062650 rif1 1-to-1
Fruitfly dm6 FBgn0050085 Rif1 1-to-1