Special

ENSG00000080345 @ hg38

Biotype
protein_coding
Gene Symbol
RIF1
Description
replication timing regulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:23207]
Coordinates
chr2:151409883-151508013:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
18.58
40.34
0
Alternative 5'ss
24
chr2:151441968-151441991
+
81.42
40.34
0
Exon Skipping
20
chr2:151468290-151468309
+
1.62
33.3
0
Exon Skipping
137
chr2:151483199-151483335
+
87.84
68.82
0
Exon Skipping
152
chr2:151503034-151503185
+
59.97
97.22
0
Exon Skipping
114
chr2:151410414-151410527
+
95.52
58.18
0
Exon Skipping
93
chr2:151422950-151423042
+
89.84
72.39
0
Exon Skipping
43
chr2:151456578-151456620
+
97.75
27.33
0
Exon Skipping
78
chr2:151468474-151468551
+
60.19
96.18
0
Exon Skipping
54
chr2:151469054-151469107
+
3.71
34.48
0
Exon Skipping
55
chr2:151462884-151462938
+
83.06
40.39
0
Exon Skipping
267
chr2:151465854-151466120
+
97.17
26.07
0
Exon Skipping
128
chr2:151416561-151416688
+
97.86
29.19
0
Exon Skipping
95
chr2:151416807-151416901
+
96.67
31.95
0
Exon Skipping
181
chr2:151443529-151443709
+
98.17
42.53
0
Exon Skipping
136
chr2:151499405-151499540
+
18.33
74.68
0
Exon Skipping
130
chr2:151480098-151480227
+
1.2
28.3
0
Intron Retention
1332
chr2:151437352-151438683
+
6.37
73.39
0
Intron Retention
327
chr2:151468147-151468473
+
8.86
53.37
0
Intron Retention
2570
chr2:151420380-151422949
+
6.45
52.71
0
Intron Retention
89
chr2:151468552-151468640
+
8.53
56.06
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000036202 Rif1 1-to-1
Mouse mm9 ENSMUSG00000036202 Rif1 1-to-1
Rat rn6 ENSRNOG00000054901 Rif1 1-to-1
Cow bosTau6 ENSBTAG00000021020 RIF1 1-to-1
Chicken galGal4 ENSGALG00000012484 RIF1 1-to-1
Chicken galGal3 ENSGALG00000012484 RIF1 1-to-1
Zebrafish danRer10 ENSDARG00000062650 rif1 1-to-1
Fruitfly dm6 FBgn0050085 Rif1 1-to-1