Special

ENSG00000104450 @ hg38

Biotype
protein_coding
Gene Symbol
SPAG1
Description
sperm associated antigen 1 [Source:HGNC Symbol;Acc:HGNC:11212]
Coordinates
chr8:100157906-100259278:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
73.78
71.75
0
Alternative 5'ss
10
chr8:100158119-100158128
+
25.11
71.75
0
Exon Skipping
339
chr8:100213090-100213428
+
94.17
63.64
0
Exon Skipping
167
chr8:100225173-100225339
+
97.54
100
0
Exon Skipping
133
chr8:100231156-100231288
+
97.26
68.38
0
Exon Skipping
127
chr8:100233411-100233537
+
86.93
45.75
0
Exon Skipping
142
chr8:100162279-100162420
+
67.6
68.09
0
Exon Skipping
126
chr8:100177816-100177941
+
96.59
22.64
0
Exon Skipping
100
chr8:100213819-100213918
+
68
90.41
0
Exon Skipping
153
chr8:100220279-100220431
+
94.4
22.47
0
Exon Skipping
165
chr8:100239240-100239404
+
90.85
74.87
0
Exon Skipping
92
chr8:100223662-100223753
+
3.64
44.05
0
Intron Retention
390
chr8:100213429-100213818
+
8.99
63.16
0
Intron Retention
6360
chr8:100213919-100220278
+
16.09
79.04
0
Intron Retention
5702
chr8:100233538-100239239
+
7.58
52.11
0
Intron Retention
998
chr8:100239405-100240402
+
7.99
71.43
0
Intron Retention
119
chr8:100240772-100240890
+
8.43
69.7
0
Intron Retention
565
chr8:100184063-100184627
+
7.77
41.67
0
Intron Retention
18821
chr8:100194269-100213089
+
40.17
50.42
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000037617 Spag1 1-to-1
Mouse mm9 ENSMUSG00000037617 Spag1 1-to-1
Rat rn6 ENSRNOG00000010078 Spag1 1-to-1
Cow bosTau6 ENSBTAG00000032544 SPAG1 1-to-1
Chicken galGal4 ENSGALG00000016037 SPAG1 1-to-1
Chicken galGal3 ENSGALG00000016037 SPAG1 1-to-1
Zebrafish danRer10 ENSDARG00000004017 spag1a 1-to-2
Zebrafish danRer10 ENSDARG00000069499 spag1b 1-to-2
Fruitfly dm6 FBgn0039463 CG18472 2-to-1