Special

ENSG00000115183 @ hg38

Biotype
protein_coding
Gene Symbol
TANC1
Description
tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [Source:HGNC Symbol;Acc:HGNC:29364]
Coordinates
chr2:158968671-159232659:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
15.51
41.15
0
Alternative 5'ss
21
chr2:159169352-159169372
+
84.49
41.15
0
Exon Skipping
54
chr2:159076475-159076528
+
3.79
28.09
0
Exon Skipping
363
chr2:159089584-159089946
+
7.89
69.5
0
Exon Skipping
105
chr2:159136194-159136298
+
94.33
27.03
0
Exon Skipping
131
chr2:159149142-159149272
+
91.04
36.84
0
Exon Skipping
187
chr2:159150370-159150556
+
91.78
33.77
0
Exon Skipping
264
chr2:159163283-159163546
+
90.47
27.44
0
Exon Skipping
123
chr2:159169250-159169372
+
95.31
22.72
0
Exon Skipping
87
chr2:158994902-158994988
+
4.69
40.43
0
Exon Skipping
128
chr2:158970687-158970814
+
1.57
39.1
0
Exon Skipping
138
chr2:159141914-159142051
+
1.97
100
0
Exon Skipping
133
chr2:159224232-159224364
+
99.62
25
0
Intron Retention
2181
chr2:159196794-159198974
+
11.29
46.18
0
Intron Retention
330
chr2:159219362-159219691
+
26.04
65.58
0
Intron Retention
4364
chr2:159219868-159224231
+
10.23
46.56
0
Intron Retention
2039
chr2:159225780-159227818
+
11.05
31.58
0
Intron Retention
830
chr2:159227966-159228795
+
18.72
61.76
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000035168 Tanc1 1-to-1
Mouse mm9 ENSMUSG00000035168 Tanc1 1-to-1
Rat rn6 ENSRNOG00000025394 Tanc1 1-to-1
Cow bosTau6 ENSBTAG00000004177 TANC1 1-to-1
Chicken galGal4 ENSGALG00000012570 TANC1 1-to-1
Chicken galGal3 ENSGALG00000012570 TANC1 1-to-1
Zebrafish danRer10 ENSDARG00000077073 tanc1a 1-to-2
Zebrafish danRer10 ENSDARG00000089190 TANC1 (2 of 2) 1-to-2