Special

ENSG00000130779 @ hg38

Biotype
protein_coding
Gene Symbol
CLIP1
Description
CAP-Gly domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]
Coordinates
chr12:122271432-122422632:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
137
chr12:122417327-122417463
-
36.89
74.7
0
Exon Skipping
170
chr12:122406756-122406925
-
5.86
30.23
0
Exon Skipping
112
chr12:122400132-122400243
-
8.35
53.85
0
Exon Skipping
223
chr12:122360959-122361181
-
99.3
25.72
0
Exon Skipping
6
chr12:122276439-122276444
-
18.82
96.66
0
Exon Skipping
117
chr12:122336632-122336748
-
91.39
81.91
0
Exon Skipping
198
chr12:122355115-122355312
-
97.75
44.12
0
Exon Skipping
33
chr12:122351111-122351143
-
9.61
96.75
0
Exon Skipping
105
chr12:122347375-122347479
-
22.88
90.14
0
Exon Skipping
156
chr12:122340753-122340908
-
50.15
88.66
0
Intron Retention
4004
chr12:122336749-122340752
-
4.79
50.2
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000049550 Clip1 1-to-1
Mouse mm9 ENSMUSG00000049550 Clip1 1-to-1
Rat rn6 ENSRNOG00000001247 Clip1 1-to-1
Cow bosTau6 ENSBTAG00000016779 CLIP1 1-to-1
Chicken galGal4 ENSGALG00000004467 CLIP1 1-to-1
Chicken galGal3 ENSGALG00000004467 CLIP1_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000078722 clip1a 1-to-2
Zebrafish danRer10 ENSDARG00000079483 CLIP1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0020503 CLIP-190 3-to-1