FBgn0020503 @ dm6
Biotype
protein_coding
Gene Symbol
CLIP-190
Description
The gene Cytoplasmic linker protein 190 is referred to in FlyBase by the symbol DmelCLIP-190 (CG5020, FBgn0020503). It is a protein_coding_gene from Dmel. It has 16 annotated transcripts and 16 polypeptides (15 unique). Gene sequence location is 2L:17384700..17409698. Its molecular function is described by: microtubule binding; myosin VI heavy chain binding; actin binding; protein binding; microtubule plus-end binding. It is involved in the biological process described with: nuclear migration; cytoplasmic microtubule organization; cellularization; establishment of mitotic spindle orientation. 21 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 18-24 hour embryonic stages, at stages throughout the pupal period, in adult male stages.
Coordinates
chr2L:17384700-17409698:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000106665 | CLIP2 | 1-to-3 |
| Human | hg38 | ENSG00000130779 | CLIP1 | 1-to-3 |
| Human | hg19 | ENSG00000106665 | CLIP2 | 1-to-3 |
| Human | hg19 | ENSG00000130779 | CLIP1 | 1-to-3 |
| Mouse | mm10 | ENSMUSG00000049550 | Clip1 | 1-to-2 |
| Mouse | mm10 | ENSMUSG00000063146 | Clip2 | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000049550 | Clip1 | 1-to-2 |
| Mouse | mm9 | ENSMUSG00000063146 | Clip2 | 1-to-2 |
| Rat | rn6 | ENSRNOG00000001247 | Clip1 | 1-to-2 |
| Rat | rn6 | ENSRNOG00000021611 | Clip2 | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000011875 | CLIP2 | 1-to-2 |
| Cow | bosTau6 | ENSBTAG00000016779 | CLIP1 | 1-to-2 |
| Chicken | galGal4 | ENSGALG00000001762 | 1-to-3 | |
| Chicken | galGal4 | ENSGALG00000004467 | CLIP1 | 1-to-3 |
| Chicken | galGal3 | ENSGALG00000001762 | 1-to-3 | |
| Chicken | galGal3 | ENSGALG00000004467 | CLIP1_CHICK | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000059596 | clip2 | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000078722 | clip1a | 1-to-3 |
| Zebrafish | danRer10 | ENSDARG00000079483 | CLIP1 (2 of 2) | 1-to-3 |