Special

ENSBTAG00000016779 @ bosTau6

Biotype
protein_coding
Gene Symbol
CLIP1
Description
CAP-GLY domain containing linker protein 1 [Source:HGNC Symbol;Acc:HGNC:10461]
Coordinates
chr17:55245237-55360147:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
6.49
84.39
0
Alternative 5'ss
228
chr17:55309929-55310156
+
93.34
86.87
0
Exon Skipping
6
chr17:55356188-55356193
+
32.56
92.64
0
Exon Skipping
198
chr17:55297220-55297417
+
97.18
85.82
0
Exon Skipping
33
chr17:55301875-55301907
+
15.78
81.78
0
Exon Skipping
105
chr17:55305472-55305576
+
29.23
83.69
0
Exon Skipping
117
chr17:55312145-55312261
+
94.33
85.76
0
Intron Retention
2283
chr17:55355063-55357345
+
9.6
37.65
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130779 CLIP1 1-to-1
Human hg19 ENSG00000130779 CLIP1 1-to-1
Mouse mm10 ENSMUSG00000049550 Clip1 1-to-1
Mouse mm9 ENSMUSG00000049550 Clip1 1-to-1
Rat rn6 ENSRNOG00000001247 Clip1 1-to-1
Chicken galGal4 ENSGALG00000004467 CLIP1 1-to-1
Chicken galGal3 ENSGALG00000004467 CLIP1_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000078722 clip1a 1-to-1
Fruitfly dm6 FBgn0020503 CLIP-190 2-to-1