Special

ENSRNOG00000001247 @ rn6

Biotype
protein_coding
Gene Symbol
Clip1
Description
CAP-GLY domain containing linker protein 1 [Source:RGD Symbol;Acc:67404]
Coordinates
chr12:38345456-38452652:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
22.7
93.13
0
Alternative 5'ss
228
chr12:38400419-38400646
+
77.3
93.13
0
Exon Skipping
88
chr12:38410191-38410278
+
1.55
26.03
0
Exon Skipping
21
chr12:38443902-38443922
+
2.79
48.98
0
Exon Skipping
158
chr12:38369489-38369646
+
0.41
11.65
0
Exon Skipping
6
chr12:38448790-38448795
+
37.43
100
0
Exon Skipping
198
chr12:38388691-38388888
+
94.4
88.22
0
Exon Skipping
117
chr12:38403548-38403664
+
76.86
100
0
Exon Skipping
33
chr12:38392055-38392087
+
14.95
99.57
0
Exon Skipping
105
chr12:38395527-38395631
+
38.29
95.89
0
Intron Retention
6726
chr12:38400419-38407144
+
16.44
37.22
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130779 CLIP1 1-to-1
Human hg19 ENSG00000130779 CLIP1 1-to-1
Mouse mm10 ENSMUSG00000049550 Clip1 1-to-1
Mouse mm9 ENSMUSG00000049550 Clip1 1-to-1
Cow bosTau6 ENSBTAG00000016779 CLIP1 1-to-1
Chicken galGal4 ENSGALG00000004467 CLIP1 1-to-1
Chicken galGal3 ENSGALG00000004467 CLIP1_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000078722 clip1a 1-to-2
Zebrafish danRer10 ENSDARG00000079483 CLIP1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0020503 CLIP-190 2-to-1