Special

ENSG00000135870 @ hg38

Biotype
protein_coding
Gene Symbol
RC3H1
Description
ring finger and CCCH-type domains 1 [Source:HGNC Symbol;Acc:HGNC:29434]
Coordinates
chr1:173931214-174022297:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
39.16
75.07
0
Alternative 3'ss
27
chr1:173943589-173943615
-
60.75
75.07
0
Alternative 3'ss
0
NA
-
58.9
58.43
0
Alternative 3'ss
3
chr1:173938872-173938874
-
41.06
58.43
0
Alternative 3'ss
46
chr1:173964079-173964124
-
9.78
57.45
0
Alternative 3'ss
109
chr1:173964079-173964187
-
90.08
57.8
0
Alternative 5'ss
0
NA
-
5.68
63.04
0
Alternative 5'ss
166
chr1:174022096-174022261
-
93.82
63.04
0
Exon Skipping
66
chr1:173985090-173985155
-
2.82
25
0
Exon Skipping
174
chr1:173943442-173943615
-
89.79
86.96
0
Exon Skipping
153
chr1:173951986-173952138
-
98.13
32.16
0
Exon Skipping
119
chr1:173972509-173972627
-
96.4
55.47
0
Exon Skipping
282
chr1:173964839-173965120
-
97.43
100
0
Intron Retention
8135
chr1:173984620-173992754
-
8.98
70.91
0
Intron Retention
2887
chr1:173943589-173946475
-
31.47
64.17
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000040423 Rc3h1 1-to-1
Mouse mm9 ENSMUSG00000040423 Rc3h1 1-to-1
Cow bosTau6 ENSBTAG00000023867 RC3H2 2-to-1
Chicken galGal4 ENSGALG00000004587 RC3H1 1-to-1
Chicken galGal3 ENSGALG00000004587 RC3H1 1-to-1
Zebrafish danRer10 ENSDARG00000062550 rc3h1 1-to-2
Zebrafish danRer10 ENSDARG00000063182 RC3H1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0036621 roq 2-to-1