Special

ENSMUSG00000029797 @ mm10

Biotype
protein_coding
Gene Symbol
Sspo
Description
SCO-spondin [Source:MGI Symbol;Acc:MGI:2674311]
Coordinates
chr6:48448229-48501250:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
58.07
28.59
0
Alternative 5'ss
9
chr6:48498394-48498402
+
41.93
28.59
0
Exon Skipping
172
chr6:48452163-48452334
+
77.3
68.09
0
Exon Skipping
144
chr6:48470878-48471021
+
80.93
33.55
0
Exon Skipping
117
chr6:48494072-48494188
+
68.83
100
0
Exon Skipping
151
chr6:48500371-48500521
+
91.64
50
0
Exon Skipping
210
chr6:48487902-48488111
+
95.44
26.46
0
Exon Skipping
168
chr6:48488330-48488497
+
89.24
27.85
0
Exon Skipping
80
chr6:48481237-48481316
+
96.43
12.77
0
Exon Skipping
170
chr6:48482654-48482823
+
88.52
30.51
0
Exon Skipping
64
chr6:48468457-48468520
+
91.5
30.61
0
Exon Skipping
47
chr6:48496619-48496665
+
79.82
39.34
0
Exon Skipping
166
chr6:48467598-48467763
+
80.21
69.77
0
Exon Skipping
128
chr6:48496136-48496263
+
94.76
100
0
Intron Retention
241
chr6:48498403-48498643
+
24.08
37.04
0
Intron Retention
1596
chr6:48498775-48500370
+
16.34
38.15
0
Intron Retention
555
chr6:48500522-48501076
+
26.37
52.39
0
Intron Retention
163
chr6:48480457-48480619
+
13.81
24.44
0
Intron Retention
1337
chr6:48481317-48482653
+
6.73
20.46
0
Intron Retention
471
chr6:48482824-48483294
+
8.23
27.12
0
Intron Retention
521
chr6:48487381-48487901
+
12.44
18.21
0
Intron Retention
246
chr6:48491163-48491408
+
24.33
75.06
0
Intron Retention
521
chr6:48491577-48492097
+
11.66
47.01
0
Intron Retention
277
chr6:48451886-48452162
+
19.69
17.2
0
Intron Retention
709
chr6:48496666-48497374
+
41.96
78.32
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Rat rn6 ENSRNOG00000025848 Sspo 1-to-1
Cow bosTau6 ENSBTAG00000008542 SSPO 1-to-1
Chicken galGal4 ENSGALG00000004919 SSPO 1-to-1
Chicken galGal3 ENSGALG00000004919 1-to-1
Zebrafish danRer10 ENSDARG00000067859 scospondin 1-to-1
Fruitfly dm6 FBgn0029167 Hml 12-to-1