Special

ENSMUSG00000029797 @ mm9

Biotype
protein_coding
Gene Symbol
Sspo
Description
SCO-spondin [Source:MGI Symbol;Acc:MGI:2674311]
Coordinates
chr6:48398228-48451249:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
58.2
28.59
0
Alternative 5'ss
9
chr6:48448393-48448401
+
41.8
28.59
0
Exon Skipping
172
chr6:48402162-48402333
+
48.5
84.95
0
Exon Skipping
144
chr6:48420877-48421020
+
85.69
31.16
0
Exon Skipping
117
chr6:48444071-48444187
+
80.37
37.75
0
Exon Skipping
151
chr6:48450370-48450520
+
92.42
50
0
Exon Skipping
168
chr6:48438329-48438496
+
91.45
18.75
0
Exon Skipping
80
chr6:48431236-48431315
+
97.07
12.77
0
Exon Skipping
170
chr6:48432653-48432822
+
90.9
21.43
0
Exon Skipping
64
chr6:48418456-48418519
+
91.5
30.61
0
Exon Skipping
143
chr6:48446379-48446521
+
96.66
20.83
0
Exon Skipping
47
chr6:48446618-48446664
+
78.81
38.09
0
Intron Retention
241
chr6:48448402-48448642
+
22.93
37.04
0
Intron Retention
1596
chr6:48448774-48450369
+
16.18
38.15
0
Intron Retention
555
chr6:48450521-48451075
+
26.37
52.39
0
Intron Retention
326
chr6:48409630-48409955
+
7.03
20
0
Intron Retention
163
chr6:48430456-48430618
+
13.36
24.44
0
Intron Retention
1337
chr6:48431316-48432652
+
6.07
20.46
0
Intron Retention
521
chr6:48437380-48437900
+
14.96
14.35
0
Intron Retention
1200
chr6:48438497-48439696
+
12.71
31.84
0
Intron Retention
246
chr6:48441162-48441407
+
24.3
75.06
0
Intron Retention
521
chr6:48441576-48442096
+
11.99
47.01
0
Intron Retention
277
chr6:48401885-48402161
+
21.35
9.69
0
Intron Retention
709
chr6:48446665-48447373
+
50.13
69.56
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Rat rn6 ENSRNOG00000025848 Sspo 1-to-1
Cow bosTau6 ENSBTAG00000008542 SSPO 1-to-1
Chicken galGal4 ENSGALG00000004919 SSPO 1-to-1
Chicken galGal3 ENSGALG00000004919 1-to-1
Zebrafish danRer10 ENSDARG00000067859 scospondin 1-to-1
Fruitfly dm6 FBgn0029167 Hml 12-to-1