Special

ENSMUSG00000036529 @ mm10

Biotype
protein_coding
Gene Symbol
Sbf1
Description
SET binding factor 1 [Source:MGI Symbol;Acc:MGI:1925230]
Coordinates
chr15:89288236-89315311:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
30.89
66.47
0
Alternative 3'ss
4
chr15:89305469-89305472
-
69.11
66.47
0
Alternative 5'ss
0
NA
-
71.12
62.2
0
Alternative 5'ss
4
chr15:89305540-89305543
-
28.88
62.2
0
Exon Skipping
78
chr15:89295952-89296029
-
67.89
96.77
0
Exon Skipping
24
chr15:89307172-89307195
-
7.86
84.26
0
Intron Retention
77
chr15:89305086-89305162
-
14.16
59.96
0
Intron Retention
83
chr15:89304798-89304880
-
1.56
89.68
0
Intron Retention
79
chr15:89302526-89302604
-
3.34
56.87
0
Intron Retention
74
chr15:89302378-89302451
-
5.84
68.61
0
Intron Retention
211
chr15:89301971-89302181
-
12.44
74.13
0
Intron Retention
3906
chr15:89295577-89299482
-
28.34
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000100241 SBF1 1-to-1
Human hg19 ENSG00000100241 SBF1 1-to-1
Rat rn6 ENSRNOG00000008392 Sbf1 1-to-1
Cow bosTau6 ENSBTAG00000021337 SBF1 1-to-1
Chicken galGal4 ENSGALG00000012438 SBF1 1-to-1
Chicken galGal3 ENSGALG00000012438 SBF1 1-to-1
Zebrafish danRer10 ENSDARG00000062968 sbf1 1-to-1
Fruitfly dm6 FBgn0025802 Sbf 2-to-1