Special

ENSMUSG00000046201 @ mm9

Biotype
protein_coding
Gene Symbol
Scaf8
Description
SR-related CTD-associated factor 8 [Source:MGI Symbol;Acc:MGI:1925212]
Coordinates
chr17:3114972-3198855:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
24.38
40.3
0
Alternative 3'ss
3
chr17:3169327-3169329
+
75.62
40.3
0
Alternative 3'ss
0
NA
+
86.32
74.44
0
Alternative 3'ss
3
chr17:3177090-3177092
+
13.68
74.44
0
Exon Skipping
177
chr17:3167963-3168139
+
99.58
42.78
0
Exon Skipping
145
chr17:3191817-3191961
+
99.72
33.89
0
Exon Skipping
62
chr17:3122053-3122114
+
12.97
33.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000213079 SCAF8 1-to-1
Human hg19 ENSG00000213079 RBM16 1-to-1
Rat rn6 ENSRNOG00000016919 Scaf8 1-to-1
Cow bosTau6 ENSBTAG00000031917 SCAF8 1-to-1
Chicken galGal4 ENSGALG00000013635 SCAF8 1-to-1
Chicken galGal3 ENSGALG00000013635 SCAF8 1-to-1
Zebrafish danRer10 ENSDARG00000100056 scaf8 1-to-1
Fruitfly dm6 FBgn0034598 CG4266 2-to-1