Special

ENSMUSG00000057738 @ mm10

Biotype
protein_coding
Gene Symbol
Sptan1
Description
spectrin alpha, non-erythrocytic 1 [Source:MGI Symbol;Acc:MGI:98386]
Coordinates
chr2:29965560-30031451:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
218
chr2:29996737-29996954
+
99.43
74.55
0
Exon Skipping
15
chr2:30014158-30014172
+
39.61
100
0
Exon Skipping
60
chr2:30001100-30001159
+
55.31
86.71
1
Exon Skipping
63
chr2:30028644-30028706
+
1.85
26.43
1
Exon Skipping
147
chr2:30011186-30011332
+
99.97
1.2
1
Exon Skipping
36
chr2:30004505-30004540
+
99.84
3.47
1
Intron Retention
205
chr2:29993956-29994160
+
2.26
59.68
0
Intron Retention
823
chr2:30006671-30007493
+
1.99
93.55
0
Intron Retention
2168
chr2:30000063-30002230
+
18.34
77.51
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197694 SPTAN1 1-to-1
Human hg19 ENSG00000197694 SPTAN1 1-to-1
Rat rn6 ENSRNOG00000015396 Sptan1 1-to-1
Cow bosTau6 ENSBTAG00000015327 SPTAN1 1-to-1
Chicken galGal4 ENSGALG00000004719 SPTAN1 1-to-1
Chicken galGal3 ENSGALG00000004719 SPTAN1 2-to-1
Zebrafish danRer10 ENSDARG00000019231 spna2 1-to-1
Fruitfly dm6 FBgn0250789 alpha-Spec 1-to-1