Special

ENSGALG00000004719 @ galGal3

Biotype
protein_coding
Gene Symbol
SPTAN1
Description
Coordinates
chr17:5774492-5812561:+
Assembly
galGal3
Other assemblies
galGal4

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]


EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
51
chr17:5769284-5769334
+
6.09
71.89
0
Exon Skipping
60
chr17:5789630-5789689
+
18.23
91.89
1
Exon Skipping
18
chr17:5806400-5806417
+
79.54
76.31
0
Exon Skipping
63
chr17:5808263-5808325
+
8.16
90.97
1
Exon Skipping
155
chr17:5779855-5780009
+
97.88
32.11
0
Exon Skipping
36
chr17:5768160-5768195
+
1.79
29.06
0
Exon Skipping
36
chr17:5793128-5793163
+
99.94
0.86
1
Exon Skipping
147
chr17:5796566-5796712
+
100
0.09
1
Intron Retention
102
chr17:5805578-5805679
+
65.2
86.16
0
Intron Retention
3793
chr17:5805696-5809488
+
70.92
78.2
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000163554 SPTA1 1-to-2
Human hg38 ENSG00000197694 SPTAN1 1-to-2
Human hg19 ENSG00000163554 SPTA1 1-to-2
Human hg19 ENSG00000197694 SPTAN1 1-to-2
Mouse mm10 ENSMUSG00000026532 Spta1 1-to-2
Mouse mm10 ENSMUSG00000057738 Sptan1 1-to-2
Mouse mm9 ENSMUSG00000026532 Spna1 1-to-2
Mouse mm9 ENSMUSG00000057738 Spna2 1-to-2
Rat rn6 ENSRNOG00000015396 Sptan1 1-to-1
Cow bosTau6 ENSBTAG00000000888 SPTA1 1-to-2
Cow bosTau6 ENSBTAG00000015327 SPTAN1 1-to-2
Zebrafish danRer10 ENSDARG00000019231 spna2 1-to-1
Fruitfly dm6 FBgn0250789 alpha-Spec 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"