Special

ENSMUSG00000057738 @ mm9

Biotype
protein_coding
Gene Symbol
Spna2
Description
spectrin alpha 2 [Source:MGI Symbol;Acc:MGI:98386]
Coordinates
chr2:29821080-29886971:+
Assembly
mm9
Other assemblies
mm10

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
110
chr2:29839807-29839916
+
0.29
32.53
0
Exon Skipping
15
chr2:29869678-29869692
+
45.53
99.87
0
Exon Skipping
60
chr2:29856620-29856679
+
52.33
90.02
1
Exon Skipping
63
chr2:29884164-29884226
+
1.81
26.43
1
Exon Skipping
147
chr2:29866706-29866852
+
99.98
1.19
1
Exon Skipping
36
chr2:29860025-29860060
+
99.8
3.15
1
Intron Retention
2168
chr2:29855583-29857750
+
17.9
78.05
0
Intron Retention
823
chr2:29862191-29863013
+
1.29
93.55
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197694 SPTAN1 1-to-1
Human hg19 ENSG00000197694 SPTAN1 1-to-1
Rat rn6 ENSRNOG00000015396 Sptan1 1-to-1
Cow bosTau6 ENSBTAG00000015327 SPTAN1 1-to-1
Chicken galGal4 ENSGALG00000004719 SPTAN1 2-to-1
Chicken galGal3 ENSGALG00000004719 SPTAN1 2-to-1
Zebrafish danRer10 ENSDARG00000019231 spna2 2-to-1
Fruitfly dm6 FBgn0250789 alpha-Spec 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"