Special

ENSMUSG00000066842 @ mm9

Biotype
protein_coding
Gene Symbol
Hmcn1
Description
hemicentin 1 [Source:MGI Symbol;Acc:MGI:2685047]
Coordinates
chr1:152409654-152840565:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
351
chr1:152424402-152424752
-
16.99
32.84
0
Exon Skipping
82
chr1:152503823-152503904
-
90.45
20
0
Exon Skipping
71
chr1:152723555-152723625
-
97.31
13.45
0
Intron Retention
1139
chr1:152602514-152603652
-
7.08
32.91
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000143341 HMCN1 1-to-1
Human hg19 ENSG00000143341 HMCN1 1-to-1
Rat rn6 ENSRNOG00000028627 Hmcn1 1-to-1
Cow bosTau6 ENSBTAG00000015235 HMCN1 1-to-1
Chicken galGal4 ENSGALG00000005141 2-to-1
Chicken galGal3 ENSGALG00000005141 HMCN1 2-to-1
Zebrafish danRer10 ENSDARG00000016936 hmcn1 1-to-1
Fruitfly dm6 FBgn0033159 Dscam1 4-to-4
Fruitfly dm6 FBgn0261046 Dscam3 4-to-4
Fruitfly dm6 FBgn0263219 Dscam4 4-to-4
Fruitfly dm6 FBgn0265296 Dscam2 4-to-4