Special

ENSBTAG00000015235 @ bosTau6

Biotype
protein_coding
Gene Symbol
HMCN1
Description
Bos taurus hemicentin 1 (HMCN1), mRNA. [Source:RefSeq mRNA;Acc:NM_001192537]
Coordinates
chr16:68192901-68733392:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
150
chr16:68606855-68607004
+
96.65
11.16
0
Exon Skipping
82
chr16:68606206-68606287
+
79.03
6.47
0
Exon Skipping
351
chr16:68713777-68714127
+
17.25
38.24
0
Exon Skipping
160
chr16:68609900-68610059
+
96.89
13.59
0
Exon Skipping
114
chr16:68605475-68605588
+
97.48
12.61
0
Exon Skipping
97
chr16:68598489-68598585
+
98.02
11.87
0
Intron Retention
574
chr16:68672717-68673290
+
23.51
89.73
0
Intron Retention
135
chr16:68673462-68673596
+
17.63
84.58
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000143341 HMCN1 1-to-1
Human hg19 ENSG00000143341 HMCN1 1-to-1
Mouse mm10 ENSMUSG00000066842 Hmcn1 1-to-1
Mouse mm9 ENSMUSG00000066842 Hmcn1 1-to-1
Rat rn6 ENSRNOG00000028627 Hmcn1 1-to-1
Chicken galGal4 ENSGALG00000005141 1-to-1
Chicken galGal3 ENSGALG00000005141 HMCN1 2-to-1
Zebrafish danRer10 ENSDARG00000016936 hmcn1 1-to-1
Fruitfly dm6 FBgn0033159 Dscam1 4-to-4
Fruitfly dm6 FBgn0261046 Dscam3 4-to-4
Fruitfly dm6 FBgn0263219 Dscam4 4-to-4
Fruitfly dm6 FBgn0265296 Dscam2 4-to-4