Special

ENSGALG00000005141 @ galGal3

Biotype
protein_coding
Gene Symbol
HMCN1
Description
Coordinates
chr8_random:220237-383455:+
Assembly
galGal3
Other assemblies
galGal4

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]


EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
94.33
33.78
0
Alternative 3'ss
183
chr8_random:287417-287599
+
5.45
31.53
0
Alternative 3'ss
0
NA
+
13.81
24.07
0
Alternative 3'ss
5
chr8_random:339611-339615
+
86.19
24.07
0
Alternative 5'ss
0
NA
+
98.04
76.96
0
Alternative 5'ss
298
chr8_random:372232-372529
+
1.22
50
0
Exon Skipping
159
chr8_random:223400-223558
+
94.35
19.86
0
Exon Skipping
220
chr8_random:242206-242425
+
8.88
38.04
0
Exon Skipping
121
chr8_random:243168-243288
+
95.29
18.18
0
Exon Skipping
171
chr8_random:361170-361340
+
94.3
36.16
0
Exon Skipping
171
chr8_random:362729-362899
+
94.67
51.19
0
Exon Skipping
138
chr8_random:367491-367628
+
94.1
54.84
0
Exon Skipping
238
chr8_random:369653-369890
+
96.67
64.64
0
Exon Skipping
135
chr8_random:373872-374006
+
53.46
62.81
0
Exon Skipping
126
chr8_random:374802-374927
+
88.35
53.13
0
Exon Skipping
264
chr8_random:243788-244051
+
95.98
42.83
0
Exon Skipping
347
chr8_random:379031-379377
+
5.06
28.71
0
Exon Skipping
120
chr8_random:381753-381872
+
93.42
26.59
0
Exon Skipping
138
chr8_random:224347-224484
+
4.49
22.17
0
Exon Skipping
127
chr8_random:273953-274079
+
5.06
14.94
0
Exon Skipping
273
chr8_random:279744-280016
+
96.34
20.83
0
Exon Skipping
97
chr8_random:303619-303715
+
95.94
18.63
0
Exon Skipping
486
chr8_random:313535-314020
+
4.73
13.07
0
Exon Skipping
138
chr8_random:315974-316111
+
4.86
38.93
0
Exon Skipping
80
chr8_random:345743-345822
+
27.32
59.2
0
Exon Skipping
122
chr8_random:351588-351709
+
97.34
19.86
0
Exon Skipping
171
chr8_random:361888-362058
+
94.65
36.18
0
Intron Retention
1485
chr8_random:309649-311133
+
10.45
31.15
0
Intron Retention
2890
chr8_random:311302-314191
+
31.35
70.09
0
Intron Retention
325
chr8_random:367629-367953
+
27.75
36.73
0
Intron Retention
319
chr8_random:374480-374798
+
11.6
51.39
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000143341 HMCN1 1-to-2
Human hg38 ENSG00000148357 HMCN2 1-to-2
Human hg19 ENSG00000143341 HMCN1 1-to-2
Human hg19 ENSG00000148357 HMCN2 1-to-2
Mouse mm10 ENSMUSG00000055632 Hmcn2 1-to-2
Mouse mm10 ENSMUSG00000066842 Hmcn1 1-to-2
Mouse mm9 ENSMUSG00000055632 Hmcn2 1-to-2
Mouse mm9 ENSMUSG00000066842 Hmcn1 1-to-2
Cow bosTau6 ENSBTAG00000002319 HMCN2 1-to-2
Cow bosTau6 ENSBTAG00000015235 HMCN1 1-to-2
Zebrafish danRer10 ENSDARG00000016936 hmcn1 1-to-3
Zebrafish danRer10 ENSDARG00000079327 hmcn2 1-to-3
Zebrafish danRer10 ENSDARG00000086060 hmcn2 1-to-3
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