Special

ENSRNOG00000006639 @ rn6

Biotype
protein_coding
Gene Symbol
Scn9a
Description
sodium voltage-gated channel alpha subunit 9 [Source:RGD Symbol;Acc:69368]
Coordinates
chr3:52583951-52664209:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
52.14
78.12
1
Alternative 5'ss
33
chr3:52636546-52636578
-
46.67
78.11
1
Alternative 5'ss
57
chr3:52636522-52636578
-
1.18
3.36
1
Exon Skipping
92
chr3:52657770-52657861
-
74.16
91.05
1
Exon Skipping
80
chr3:52620190-52620269
-
33.57
85.14
0
Intron Retention
2714
chr3:52633832-52636545
-
11.53
32.81
0
Intron Retention
11005
chr3:52614230-52625234
-
7.17
20.73
0
Intron Retention
4263
chr3:52591589-52595851
-
10.38
37.1
0
Intron Retention
502
chr3:52659273-52659774
-
8.13
39.76
0
Intron Retention
1282
chr3:52657862-52659143
-
24.65
62.83
0
Intron Retention
975
chr3:52656795-52657769
-
29.95
57.05
0
Intron Retention
10945
chr3:52645637-52656581
-
17.5
93.56
0
Intron Retention
1125
chr3:52644448-52645572
-
35.65
95.35
0
Intron Retention
1719
chr3:52642587-52644305
-
31.94
96.55
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000169432 SCN9A 1-to-1
Human hg19 ENSG00000169432 SCN9A 1-to-1
Mouse mm10 ENSMUSG00000075316 Scn9a 1-to-1
Mouse mm9 ENSMUSG00000075316 Scn9a 1-to-1
Cow bosTau6 ENSBTAG00000002425 SCN9A 1-to-1