Special

ENSRNOG00000020579 @ rn6

Biotype
protein_coding
Gene Symbol
Col7a1
Description
collagen type VII alpha 1 chain [Source:RGD Symbol;Acc:1311417]
Coordinates
chr8:117694605-117726844:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
95.41
27.53
0
Alternative 3'ss
322
chr8:117699731-117700052
+
4.59
27.53
0
Alternative 5'ss
0
NA
+
92.36
35.29
0
Alternative 5'ss
22
chr8:117708925-117708946
+
7.64
35.29
0
Exon Skipping
160
chr8:117696066-117696225
+
94.9
19.05
0
Intron Retention
140
chr8:117725244-117725383
+
6.37
55.45
0
Intron Retention
86
chr8:117696226-117696311
+
13.61
29.82
0
Intron Retention
72
chr8:117707315-117707386
+
8.12
18.09
0
Intron Retention
217
chr8:117710042-117710258
+
12.96
23.09
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000114270 COL7A1 1-to-1
Human hg19 ENSG00000114270 COL7A1 1-to-1
Mouse mm10 ENSMUSG00000025650 Col7a1 1-to-1
Mouse mm9 ENSMUSG00000025650 Col7a1 1-to-1
Cow bosTau6 ENSBTAG00000019081 COL7A1 1-to-1
Chicken galGal4 ENSGALG00000005811 COL7A1 1-to-1
Chicken galGal3 ENSGALG00000005811 COL7A1 1-to-1
Zebrafish danRer10 ENSDARG00000021720 col7a1 1-to-1