Special

ENSGALG00000005811 @ galGal3

Biotype
protein_coding
Gene Symbol
COL7A1
Description
Coordinates
chr12:9319749-9347511:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
24.14
18.96
0
Alternative 3'ss
3
chr12:9327154-9327156
+
75.86
18.96
0
Exon Skipping
36
chr12:9338454-9338489
+
8.54
54.57
0
Intron Retention
80
chr12:9319920-9319999
+
4.34
97.22
0
Intron Retention
102
chr12:9320094-9320195
+
3.78
95.87
0
Intron Retention
85
chr12:9324873-9324957
+
4.29
89.47
0
Intron Retention
89
chr12:9325101-9325189
+
33.33
100
0
Intron Retention
70
chr12:9325320-9325389
+
4.56
100
0
Intron Retention
71
chr12:9325742-9325812
+
6.38
98.24
0
Intron Retention
110
chr12:9328142-9328251
+
3.56
80.93
0
Intron Retention
96
chr12:9328413-9328508
+
3.36
100
0
Intron Retention
183
chr12:9328859-9329041
+
5.57
100
0
Intron Retention
123
chr12:9329135-9329257
+
4.5
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000114270 COL7A1 1-to-1
Human hg19 ENSG00000114270 COL7A1 1-to-1
Mouse mm10 ENSMUSG00000025650 Col7a1 1-to-1
Mouse mm9 ENSMUSG00000025650 Col7a1 1-to-1
Rat rn6 ENSRNOG00000020579 Col7a1 1-to-1
Cow bosTau6 ENSBTAG00000019081 COL7A1 1-to-1
Zebrafish danRer10 ENSDARG00000021720 col7a1 1-to-1
Fruitfly dm6 FBgn0035798 frac 9-to-1