Special

ENSDARG00000021720 @ danRer10

Biotype
protein_coding
Gene Symbol
col7a1
Description
collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
Coordinates
chr6:40186699-40314609:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
9
chr6:40196207-40196215
-
95.17
89.38
0
Exon Skipping
36
chr6:40221210-40221245
-
19.55
92.9
0
Exon Skipping
36
chr6:40220849-40220884
-
81.44
92.03
0
Intron Retention
105
chr6:40188151-40188255
-
25.59
37.01
0
Intron Retention
1936
chr6:40219274-40221209
-
16.3
16.18
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000114270 COL7A1 1-to-1
Human hg19 ENSG00000114270 COL7A1 1-to-1
Mouse mm10 ENSMUSG00000025650 Col7a1 1-to-1
Mouse mm9 ENSMUSG00000025650 Col7a1 1-to-1
Rat rn6 ENSRNOG00000020579 Col7a1 1-to-1
Cow bosTau6 ENSBTAG00000019081 COL7A1 1-to-1
Chicken galGal4 ENSGALG00000005811 COL7A1 1-to-1
Chicken galGal3 ENSGALG00000005811 COL7A1 1-to-1
Fruitfly dm6 FBgn0035798 frac 13-to-1